1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. MCF-7

Experiment summary for ENCSR000DMS

doi:10.17989/ENCSR000DMS

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens MCF-7 treated with 100 nM 17β-estradiol for 45 minutes
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human MCF-7 treated with estrogen
Treatments
100 nM 17β-estradiol (CHEBI:16469) for 45 minutes
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Vishwanath Iyer, UTA
Award
U54HG004563 (Gregory Crawford, Duke)
Project
ENCODE
Date submitted
March 17, 2011
Date released
March 17, 2011
Annotation (physical modeling)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens MCF-7 cell line treated with 100 nM 17β-estradiol for 45 minutesENCBS096ENCENCAB000AXYENCLB138BUC
21Homo sapiens MCF-7 cell line treated with 100 nM 17β-estradiol for 45 minutesENCBS096ENCENCAB000AXYENCLB454PNG

Files

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Output type
Replicates

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