Experiment summary for ENCSR000DME
doi:10.17989/ENCSR000DME
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens LNCaP clone FGC treated with 1 nM 17β-hydroxy-17-methylestra-4,9,11-trien-3-one for 12 hours
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human LNCaP treated with androgen
- Treatments
- 1 nM 17β-hydroxy-17-methylestra-4,9,11-trien-3-one (CHEBI:379896) for 12 hours
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- Vishwanath Iyer, UTA
- Award
- U54HG004563 (Gregory Crawford, Duke)
- Project
- ENCODE
- External resources
- Date submitted
- July 26, 2012
- Date released
- August 27, 2012
- Annotation (BPNet-model)
- Tags
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens LNCaP clone FGC cell line treated with 1 nM 17β-hydroxy-17-methylestra-4,9,11-trien-3-one for 12 hours | ENCBS387ENC | ENCAB000AXY | ENCLB699TYF |
| 2 | 1 | Homo sapiens LNCaP clone FGC cell line treated with 1 nM 17β-hydroxy-17-methylestra-4,9,11-trien-3-one for 12 hours | ENCBS387ENC | ENCAB000AXY | ENCLB392DHD |