Experiment summary for ENCSR000DME

doi:10.17989/ENCSR000DME

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens LNCaP clone FGC treated with 1 nM 17β-hydroxy-17-methylestra-4,9,11-trien-3-one for 12 hours
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human LNCaP treated with androgen
Treatments
1 nM 17β-hydroxy-17-methylestra-4,9,11-trien-3-one (CHEBI:379896) for 12 hours
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Vishwanath Iyer, UTA
Award
U54HG004563 (Gregory Crawford, Duke)
Project
ENCODE
Date submitted
July 26, 2012
Date released
August 27, 2012
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens LNCaP clone FGC cell line treated with 1 nM 17β-hydroxy-17-methylestra-4,9,11-trien-3-one for 12 hoursENCBS387ENCENCAB000AXYENCLB699TYF
21Homo sapiens LNCaP clone FGC cell line treated with 1 nM 17β-hydroxy-17-methylestra-4,9,11-trien-3-one for 12 hoursENCBS387ENCENCAB000AXYENCLB392DHD