Experiment summary for ENCSR000CWF

doi:10.17989/ENCSR000CWF

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Mus musculus strain MEL MEL treated with 2% dimethyl sulfoxide for 5 days
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on mouse MEL treated by dimethyl sulfoxide at 2.0%
Treatments
2 percent dimethyl sulfoxide (CHEBI:28262) for 5 days
Nucleic acid type
RNA
Depleted in
rRNA
Size range
300-350
Fragmentation methods
see document
Strand specificity
Strand-specific (reverse)

Attribution

ENCODE Mouse Project
Lab
Michael Snyder, Stanford
Award
RC2HG005602 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Date submitted
June 25, 2012
Date released
June 25, 2012
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Mus musculus strain MEL MEL cell line treated with 2% dimethyl sulfoxide for 5 daysENCBS050ENCENCLB762QZB
11Mus musculus strain MEL MEL cell line treated with 2% dimethyl sulfoxide for 5 daysENCBS050ENCENCLB796NEB