Experiment summary for ENCSR000CWF
doi:10.17989/ENCSR000CWF
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Mus musculus strain MEL MEL treated with 2% dimethyl sulfoxide for 5 days
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA-seq on mouse MEL treated by dimethyl sulfoxide at 2.0%
- Treatments
- 2 percent dimethyl sulfoxide (CHEBI:28262) for 5 days
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- 300-350
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (reverse)
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE Mouse Project
- Lab
- Michael Snyder, Stanford
- Award
- RC2HG005602 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- GEO-obsolete:GSM973233
- GEO:GSE90279
- UCSC-ENCODE-mm9:wgEncodeEM001998
- Date submitted
- June 25, 2012
- Date released
- June 25, 2012
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
2 | 1 | Mus musculus strain MEL MEL cell line treated with 2% dimethyl sulfoxide for 5 days | ENCBS050ENC | ENCLB762QZB |
1 | 1 | Mus musculus strain MEL MEL cell line treated with 2% dimethyl sulfoxide for 5 days | ENCBS050ENC | ENCLB796NEB |