Experiment summary for ENCSR000CUN
doi:10.17989/ENCSR000CUN
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens mammary epithelial cell female adult (23 years)
- Biosample Type
- primary cell
- Replication type
- unreplicated
- Description
- The libraries contained in this experiment come from mammary epithelial primary whole cells, HMEpC. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR470JZL
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- UCSC-ENCODE-hg19:wgEncodeEH002683
- GEO-obsolete:GSM984621
- GEO:GSE78616
- Date submitted
- July 13, 2011
- Date released
- June 21, 2012
- Annotation (physical modeling)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens female adult (23 years) mammary epithelial primary cell | ENCBS456ENC | ENCLB555AOT |