Experiment summary for ENCSR000CTH
doi:10.17989/ENCSR000CTH
Summary
- Status
- released
- Assay
- small RNA-seq
- Biosample summary
- Homo sapiens IMR-90
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- The libraries contained in this experiment come from whole cell extracts from independent growths of cell line, IMR-90. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was not pr-treated prior to cloning.
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- <200
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- Date submitted
- January 19, 2011
- Date released
- July 9, 2012
- Annotation (physical modeling)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens IMR-90 cell line | ENCBS373ENC | ENCLB555AXV |
| 1 | 1 | Homo sapiens IMR-90 cell line | ENCBS370ENC | ENCLB555AXW |