Experiment summary for ENCSR000CIJ

Summary

Status
released
Assay
CAGE
Biosample summary
Homo sapiens K562 nuclear fraction
Biosample Type
cell line
Replication type
unreplicated
Description
CAGE on human K562 nucleus long polyA- RNA
Nucleic acid type
RNA
Depleted in
polyadenylated mRNA
Size range
>200
Lysis method
see document
Extraction method
see document
Fragmentation methods
see document
Size selection method
see document
Strand specificity
Strand-specific
Controls

Attribution

ENCODE2 project
Lab
Piero Carninci, RIKEN
Award
U54HG004557 (Thomas Gingeras, CSHL)
Project
ENCODE
Date submitted
March 23, 2011
Date released
March 23, 2011
Submitter comment
This ENCODE2 experiment replicate 1 was previously labeled replicate 0 as it was part of the generation 0 dataset.

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11K562 cell line nuclear fractionENCBS843AAAENCLB555AGX