Experiment summary for ENCSR000BZZ
doi:10.17989/ENCSR000BZZ
Summary
- Status
- released
- Assay
- ChIA-PET
- Target
- ESR1
- Biosample summary
- Homo sapiens MCF-7
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- ESR1 ChIA-PET on human MCF-7
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer I
Attribution
ENCODE2 project
- Lab
- Yijun Ruan, JAX
- Award
- R01HG004456 (Yijun Ruan, JAX)
- Project
- ENCODE
- External resources
- Date submitted
- September 24, 2011
- Date released
- May 24, 2012
- Submitter comment
- Fastq files ENCFF000KZA, ENCFF000KZB, ENCFF000KZI, and ENCFF000KZM contain reads of mixed lengths. Read lengths followed by respective number of reads: ENCFF000KZA: (20, 19306946), (37, 6863311); ENCFF000KZB: (20, 13603162), (37, 13866893); ENCFF000KZI: (20, 19306946), (37, 6863311), ENCFF000KZM: (20, 13603162), (37, 13866893).
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens MCF-7 cell line | ENCBS236AAA | ENCAB000AGD | ENCLB559JAK |
| 1 | 1 | Homo sapiens MCF-7 cell line | ENCBS236AAA | ENCAB000AGD | ENCLB559JAL |
| 3 | 1 | Homo sapiens MCF-7 cell line | ENCBS236AAA | ENCAB000AGD | ENCLB559JAO |