Experiment summary for ENCSR000ATW

doi:10.17989/ENCSR000ATW

Alternate accession: ENCSR454GCP

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CBX8
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
ChIP-seq on human K562 CBX8
Nucleic acid type
DNA
Library starting quantity
40.2ng
Size range
200-600
Fragmentation methods
see document [3-1]sonication (generic) [1-1]sonication (generic) [2-1]
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 43
Date submitted
August 6, 2012
Date released
August 6, 2012
Annotation (gkmsvm-model)
Submitter comment
As of February 16, 2017, new mapping and peak calling is required due to duplicated files.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
31Homo sapiens K562 cell lineENCBS639AAAENCAB000AEXENCLB695AMQ
11Homo sapiens K562 cell lineENCBS674MPNENCAB000AEXENCLB514VNJ
21Homo sapiens K562 cell lineENCBS979ZKWENCAB000AEXENCLB423PJC