Experiment summary for ENCSR000ATW
doi:10.17989/ENCSR000ATW
Alternate accession: ENCSR454GCP
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CBX8
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- ChIP-seq on human K562 CBX8
- Nucleic acid type
- DNA
- Library starting quantity
- 40.2ng
- Size range
- 200-600
- Fragmentation methods
- see document [3-1]sonication (generic) [1-1]sonication (generic) [2-1]
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
ENCODE2 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG004570 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- References
- Aliases
- bradley-bernstein:Project Element 43
- Date submitted
- August 6, 2012
- Date released
- August 6, 2012
- Annotation (gkmsvm-model)
- Submitter comment
- As of February 16, 2017, new mapping and peak calling is required due to duplicated files.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
3 | 1 | Homo sapiens K562 cell line | ENCBS639AAA | ENCAB000AEX | ENCLB695AMQ |
1 | 1 | Homo sapiens K562 cell line | ENCBS674MPN | ENCAB000AEX | ENCLB514VNJ |
2 | 1 | Homo sapiens K562 cell line | ENCBS979ZKW | ENCAB000AEX | ENCLB423PJC |