Experiment summary for ENCSR000AEO
doi:10.17989/ENCSR000AEO
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA Evaluation K562 Long Poly-A+ from Graveley
- Nucleic acid type
- polyadenylated mRNA
- RNA integrity number
- 9.6 [1-1]9.5 [2-1]
- Size range
- >200
- Extraction method
- Trizol
- Fragmentation methods
- chemical (Illumina TruSeq)
- Size selection method
- SPRI beads
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR449DXG
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE3 project
- Lab
- Brenton Graveley, UConn
- Award
- U54HG007005 (Brenton Graveley, UConn)
- Project
- ENCODE
- External resources
- Aliases
- encode:evaluation_set_K562_polyA_Graveley
- Date submitted
- May 19, 2013
- Date released
- June 30, 2014
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line | ENCBS087RNA | ENCLB059ZZZ |
| 2 | 1 | Homo sapiens K562 cell line | ENCBS088RNA | ENCLB060ZZZ |