Summary for ENCSR927NIT
Summary
- Status
- released
- Donor diversity
- single
- Assay
- RNA-seq, DNase-seq, ChIP-seq
- Target
- H3K27me3, H3K27ac, CTCF, H3K4me3
- Biosample summary
- head of caudate nucleus tissue, dorsolateral prefrontal cortex tissue
- Diseases
- Cognitive impairment, Alzheimer's disease
Attribution
ENCODE4 project
- Lab
- ENCODE Consortium
- Award
- U24HG009397 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- Aliases
- encode:series_E6128836
- External resources
- None submitted
- Tags
Experiments in ENCSR927NIT
7 experiments
Disease samples in series
Accession | Assay | Target | Disease | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR161ZGA | DNase-seq | Alzheimer's disease, Cognitive impairment | Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (90 or above years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR428ZCP | DNase-seq | Alzheimer's disease, Cognitive impairment | Homo sapiens with Cognitive impairment, Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR300WOR | ChIP-seq | CTCF | Alzheimer's disease, Cognitive impairment | Homo sapiens with Alzheimer's disease, Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years) | Bradley Bernstein, Broad | released | |
| ENCSR966RWA | ChIP-seq | H3K27ac | Alzheimer's disease, Cognitive impairment | Homo sapiens with Alzheimer's disease, Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years) | Bradley Bernstein, Broad | released | |
| ENCSR190FSS | ChIP-seq | H3K27me3 | Alzheimer's disease, Cognitive impairment | Homo sapiens with Alzheimer's disease, Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years) | Bradley Bernstein, Broad | released | |
| ENCSR169CRN | ChIP-seq | H3K4me3 | Alzheimer's disease, Cognitive impairment | Homo sapiens with Alzheimer's disease, Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years) | Bradley Bernstein, Broad | released |
Non-diseased experiments in series
Accession | Assay | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR910XQY | RNA-seq | Barbara Wold, Caltech | deleted |