Experiment summary for ENCSR723XFW
doi:10.17989/ENCSR723XFW
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Mus musculus strain 5xFAD/CAST (B6SJL-Tg(APPSwFlLon,PSEN1*M146L*L286V)6799Vas/Mmjax x CAST/EiJ) left cerebral cortex tissue female adult (8-10 months)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- 5xFAD X Cast L. cortex (brain)_8-10 months female
- Nucleic acid type
- RNA
- RNA integrity number
- 8
- Library starting quantity
- 300ng
- Average fragment size
- 236 [2-1]234 [1-1]
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR597UQL
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE4 project
- Lab
- Barbara Wold, Caltech
- Award
- UM1HG009443 (Barbara Wold, Caltech)
- Project
- ENCODE
- External resources
- Aliases
- barbara-wold:5xFAD_X_Cast_L._cortex_(brain)_8-10_months_female
- Date submitted
- January 28, 2022
- Date released
- February 23, 2022
- Organism Development Series
- ENCSR942HKN
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Mus musculus strain 5xFAD/CAST (B6SJL-Tg(APPSwFlLon,PSEN1*M146L*L286V)6799Vas/Mmjax x CAST/EiJ) female adult (8-10 months) left cerebral cortex tissue | ENCBS869WPR | ENCLB579LBW |
| 1 | 1 | Mus musculus strain 5xFAD/CAST (B6SJL-Tg(APPSwFlLon,PSEN1*M146L*L286V)6799Vas/Mmjax x CAST/EiJ) female adult (8-10 months) left cerebral cortex tissue | ENCBS505BIQ | ENCLB213ABI |