Experiment summary for ENCSR300FPD
doi:10.17989/ENCSR300FPD
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens A549 treated with 1 μM dexamethasone (agonist) for 4 hours
- Biosample Type
- cell line
- Replication type
- isogenic
- Treatments
- 1 μM dexamethasone (CHEBI:41879) for 4 hours
- Nucleic acid type
- RNA
- Size range
- 200-300
- Extraction method
- Qiagen RNA extraction
- Strand specificity
- Strand-specific (reverse)
- Platform
- Illumina NovaSeq 6000
Attribution
ENCODE4 project
- Lab
- Tim Reddy, Duke
- Award
- UM1HG009428 (Tim Reddy, Duke)
- Project
- ENCODE
- External resources
- Aliases
- tim-reddy:A549-wg-rnaseq-Dex
- Date released
- July 14, 2022
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 4 | 1 | Homo sapiens A549 cell line treated with 1 μM dexamethasone (agonist) for 4 hours | ENCBS749YQY | ENCLB425IXJ |
| 2 | 1 | Homo sapiens A549 cell line treated with 1 μM dexamethasone (agonist) for 4 hours | ENCBS850LSL | ENCLB034TZG |
| 3 | 1 | Homo sapiens A549 cell line treated with 1 μM dexamethasone (agonist) for 4 hours | ENCBS854SIX | ENCLB294GLR |
| 1 | 1 | Homo sapiens A549 cell line treated with 1 μM dexamethasone (agonist) for 4 hours | ENCBS739UNB | ENCLB615TXE |
| 5 | 1 | Homo sapiens A549 cell line treated with 1 μM dexamethasone (agonist) for 4 hours | ENCBS448MDY | ENCLB652NUK |