Experiment summary for ENCSR814XPE
doi:10.17989/ENCSR814XPE
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K4me3
- Biosample summary
- Homo sapiens H1
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Library starting quantity
- 60ng [2-1]107.4ng [2-2]
- Size range
- 200-600 [1-1]200-600 [4-1]200-600 [3-1]300-600 [2-1]300-600 [2-2]
- Fragmentation methods
- shearing (Covaris generic) [1-1]sonication (Bioruptor Twin) [4-1]none [3-1]sonication (generic) [2-1]sonication (generic) [2-2]
- Platform
- Illumina HiSeq 2000, Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 526
- Date submitted
- March 14, 2016
- Date released
- November 8, 2016
- Reference Epigenome
- ENCSR820QMS
- Tags
- Registry of cCREs
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens H1 cell line | ENCBS253TYD | ENCAB582RSV | ENCLB893KQS |
| 4 | 1 | Homo sapiens H1 cell line | ENCBS364BFI | ENCAB582RSV | ENCLB227LCT |
| 3 | 1 | Homo sapiens H1 cell line | ENCBS952IPA | ENCAB000BLE | ENCLB711BTD |
| 2 | 1 | Homo sapiens H1 cell line | ENCBS011NFB | ENCAB000BLF | ENCLB872HOH |
| 2 | 2 | Homo sapiens H1 cell line | ENCBS011NFB | ENCAB000BLF | ENCLB790WEO |