Summary for treatment time series ENCSR904DTN

Summary

Status
released
Description
We entrained C57BL/6J mice to a 12-hour light, 12-hour dark cycle (LD12:12) under constant temperature for two weeks, and then we transferred the mice to constant darkness. Starting at 30 hr after lights off, which corresponds to circadian time 18 (CT18), tissue samples were collected from ten mice every 4 hr for two complete sources of circadian cycles. Satchidananda et. al. Cell, Vol. 109, 307–320, May 3, 2002.
Donor diversity
single
Assay
DNase-seq
Biosample summary
liver (Mus musculus)

Attribution

ENCODE3 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG007010 (John Stamatoyannopoulos, UW)
Project
ENCODE
External resources
None submitted

Experiments in treatment time series ENCSR904DTN

AccessionPossible controlsAssayTargetDescriptionLabStatus
ENCSR802MKVDNase-seqDNase-seq for liver of C57BL/6J mice after 70 hr of constant darkness. Satchidananda et. al. Cell, Vol. 109, 307–320, May 3, 2002.John Stamatoyannopoulos, UW
released
ENCSR982PCSDNase-seqDNase-seq for liver of C57BL/6J mice after 66 hr of constant darkness. Satchidananda et. al. Cell, Vol. 109, 307–320, May 3, 2002.John Stamatoyannopoulos, UW
released
ENCSR765TONDNase-seqDNase-seq for liver of C57BL/6J mice after 62 hr of constant darkness. Satchidananda et. al. Cell, Vol. 109, 307–320, May 3, 2002.John Stamatoyannopoulos, UW
released
ENCSR297YSCDNase-seqDNase-seq for liver of C57BL/6J mice after 58 hr of constant darkness. Satchidananda et. al. Cell, Vol. 109, 307–320, May 3, 2002.John Stamatoyannopoulos, UW
released
ENCSR130IPNDNase-seqDNase-seq for liver of C57BL/6J mice after 54 hr of constant darkness. Satchidananda et. al. Cell, Vol. 109, 307–320, May 3, 2002.John Stamatoyannopoulos, UW
released
ENCSR498GAHDNase-seqDNase-seq for liver of C57BL/6J mice after 50 hr of constant darkness. Satchidananda et. al. Cell, Vol. 109, 307–320, May 3, 2002.John Stamatoyannopoulos, UW
released