bioraddbg ATAC-seq filter beads
- Status
- released
- Description
- This Docker container provides an easy to use Docker interface to a bead filtration tool with settings tailored for Bio-Rad Single Cell ATAC-seq chemistry. This container takes in .BAM files and performs "knee calling" to compute a bead barcode whitelist and jaccard index threshold for bead-to-droplet merging.
Software versions
Version | Download checksum |
---|---|
1.0.0 |