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Clear Filters
Assay
4
ChIP-seq
3
DNase-seq
1
RNA-seq
Series status
4
released
Genome assembly (visualization)
4
mm10
3
mm9
Organism
4
Mus musculus
Target of assay
4
broad histone mark
4
control
4
histone
4
histone modification
4
narrow histone mark
Biosample type
2
tissue
1
immortalized cell line
1
stem cell
Organ
1
brain
1
gonad
1
testis
Life stage
2
embryonic
1
adult
1
unknown
Available data
4
bam
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
4
fastq
1
tsv
Read length
169
36
97
50
93
100
51
76
37
101
22
130
9
75
8
51
7
25
6
125
6
29
6
30
5
150
5
85
4
108
4
202
4
45
3
132
3
133
3
139
3
28
3
32
2
117
2
136
2
27
2
37
2
38
2
41
2
43
2
47
2
82
2
86
2
87
1
113
1
152
1
20
1
200
1
35
1
42
1
52
1
53
1
72
1
74
1
83
1
84
1
88
Mapped read length
3
36
1
30
Library insert size (nt)
2
200-500
1
>175
Library made from
4
DNA
1
polyadenylated mRNA
Date released
3
February, 2016
1
January, 2016
Lab
4
ENCODE Consortium
Project
4
ENCODE
RFA
4
ENCODE3
Audit category:
4
partial reference epigenome
Showing 4 of 4 results
table-tab-icon
Series
ENCSR349GLM
released
Audit warning
1
Reference epigenome series
in ES-E14
(
Mus musculus
, embryonic
)
Targets:
Control, H3K36me3, H3K4me3, H3K4me1, H3K9ac, H3K27ac
Lab:
ENCODE Consortium
Project:
ENCODE
Series
ENCSR199TFQ
released
Audit warning
1
Reference epigenome series
in MEL cell line
(
Mus musculus
, unknown week
)
Targets:
Control, H3K36me3, H3K27me3, H3K4me3, H3K4me1, H3K9ac, H3K27ac
Lab:
ENCODE Consortium
Project:
ENCODE
Series
ENCSR404KJG
released
Audit warning
1
Reference epigenome series
in testis
(
Mus musculus
, adult, 8 week
)
Targets:
Control, H3K36me3, H3K27me3, H3K4me1, H3K4me3, H3K27ac
Lab:
ENCODE Consortium
Project:
ENCODE
Series
ENCSR205YGI
released
Audit warning
1
Reference epigenome series
in brain
(
Mus musculus
, embryonic, 14.5 day
)
Targets:
Control, H3K36me3, H3K27me3, H3K4me3, H3K4me1, H3K27ac, H3K9me3
Lab:
ENCODE Consortium
Project:
ENCODE