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Clear Filters
Assay
2
ChIP-seq
2
DNase-seq
2
RNA-seq
1
microRNA counts
1
microRNA-seq
1
whole-genome shotgun bisulfite sequencing
Series status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
1
mm10
1
mm9
Organism
1
Homo sapiens
1
Mus musculus
Target of assay
2
broad histone mark
2
control
2
histone
2
histone modification
2
narrow histone mark
Biosample type
2
immortalized cell line
Life stage
1
adult
1
unknown
Available data
2
bam
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
2
tsv
1
bed bed6+
1
bed bedMethyl
1
bed bedRnaElements
1
bigBed bed6+
1
bigBed bedMethyl
1
bigBed bedRnaElements
1
gtf
1
rcc
1
tagAlign
Read length
169
36
97
50
93
100
51
76
37
101
22
130
9
75
8
51
7
25
6
125
6
29
6
30
5
150
5
85
4
108
4
202
4
45
3
132
3
133
3
139
3
28
3
32
2
117
2
136
2
27
2
37
2
38
2
41
2
43
2
47
2
82
2
86
2
87
1
113
1
152
1
20
1
200
1
35
1
42
1
52
1
53
1
72
1
74
1
83
1
84
1
88
Mapped read length
2
36
1
28
1
50
Library insert size (nt)
1
100-300
1
200-600
1
<200
1
<30
1
>175
1
>200
Library made from
2
DNA
2
polyadenylated mRNA
1
RNA
1
miRNA
Library depleted in
1
rRNA
Date released
1
August, 2016
1
January, 2016
Lab
2
ENCODE Consortium
Project
2
ENCODE
RFA
2
ENCODE3
Audit category:
1
partial reference epigenome
Showing 2 of 2 results
table-tab-icon
Series
ENCSR835OVT
released
Audit warning
1
Reference epigenome series
in CH12.LX
(
Mus musculus
)
Targets:
Control, H3K36me3, H3K4me1, H3K4me3, H3K9ac, H3K4me2, H3K27ac
Lab:
ENCODE Consortium
Project:
ENCODE
Series
ENCSR612NLL
released
Reference epigenome series
in K562
(
Homo sapiens
, adult, 53 year
)
Targets:
H3K27me3, H3K4me1, H3K36me3, H3K27ac, H3K9me3, Control, H3K4me3
Lab:
ENCODE Consortium
Project:
ENCODE