Showing 25 of 53 results

• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBS1L

  Functional characterization series for the gene target HBS1L.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR759RSA

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MYB

  Functional characterization series for the gene target MYB.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR408VHJ

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBE1

  Functional characterization series for the gene target HBE1.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR564EPW

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG2

  Functional characterization series for the gene target HBG2.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR459QNY

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG1

  Functional characterization series for the gene target HBG1.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR449NJV

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of FEN1

  Functional characterization series for the gene target FEN1.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR278YTB

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of FADS3

  Functional characterization series for the gene target FADS3.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR630WLB

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of FADS2

  Functional characterization series for the gene target FADS2.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR968CIN

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of FADS1

  Functional characterization series for the gene target FADS1.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR382ZJS

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of GATA1

  Functional characterization series for the gene target GATA1.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: peak tiling

  Series

  ENCSR917XEU

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HDAC6

  Functional characterization series for the gene target HDAC6.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: peak tiling

  Series

  ENCSR009KPS

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MEF2C

  Functional characterization series for the gene target MEF2C.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR940PYU

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of ERP29

  Functional characterization series for the gene target ERP29.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR979QQN

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of NMU

  Functional characterization series for the gene target NMU.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR393VDD

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of CD164

  Functional characterization series for the gene target CD164.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR157WAN

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MYC

  Functional characterization series for the gene target MYC.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR825SFH

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of PVT1

  Functional characterization series for the gene target PVT1.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR496MZF

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of LMO2

  Functional characterization series for the gene target LMO2.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR321CEH

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of CAPRIN1

  Functional characterization series for the gene target CAPRIN1.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR793WTM

  released
• CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of CAT

  Functional characterization series for the gene target CAT.

  Assays: Flow-FISH CRISPR screen

  Lab: Pardis Sabeti, Broad

  Project: ENCODE

  Tiling modality: full tiling

  Series

  ENCSR794SPV

  released
• CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of WDR83OS

  Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci

  Assays: Flow-FISH CRISPR screen

  Lab: Jesse Engreitz, Stanford

  Project: ENCODE

  Elements selection method: DNase hypersensitive sites

  Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS

  Tiling modality: peak tiling

  Series

  ENCSR532VIG

  released
• CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of SEC61A1

  Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci

  Assays: Flow-FISH CRISPR screen

  Lab: Jesse Engreitz, Stanford

  Project: ENCODE

  Elements selection method: DNase hypersensitive sites

  Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS

  Tiling modality: peak tiling

  Series

  ENCSR760TSA

  released
• CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RPN1

  Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci

  Assays: Flow-FISH CRISPR screen

  Lab: Jesse Engreitz, Stanford

  Project: ENCODE

  Elements selection method: DNase hypersensitive sites

  Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS

  Tiling modality: peak tiling

  Series

  ENCSR380BWA

  released
• CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RNASEH2A

  Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci

  Assays: Flow-FISH CRISPR screen

  Lab: Jesse Engreitz, Stanford

  Project: ENCODE

  Elements selection method: DNase hypersensitive sites

  Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS

  Tiling modality: peak tiling

  Series

  ENCSR905FEH

  released
• CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAD23A

  Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci

  Assays: Flow-FISH CRISPR screen

  Lab: Jesse Engreitz, Stanford

  Project: ENCODE

  Elements selection method: DNase hypersensitive sites

  Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS

  Tiling modality: peak tiling

  Series

  ENCSR324QDY

  released