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Clear Filters
Assay title
Selected filters:
Control CRISPR screen
  • CRISPR disruption screen
    8
  • Control CRISPR screen
  • pooled clone sequencing
    4
  • CRISPR interference screen
    3
Status
  • released
    15
Target category
  • transcription factor
    4
  • chromatin remodeler
    1
Target of assay
  • Esrrb
    2
  • Sox2
    2
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    1
Organism
  • Homo sapiens
    6
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    5
Biosample classification
  • cell line
    11
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    4
Biosample term name
  • WTC11
    6
  • F123
    5
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    4
Organ
  • skin of body
    6
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Cell
  • stem cell
    11
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    6
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    6
Life stage
  • adult
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Biosample treatment
  • tioguanine
    6
Project
  • ENCODE
    15
RFA
  • ENCODE4
    15
Available file types
  • fastq
    15
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    3
Platform
  • Illumina NovaSeq 6000
    9
  • Illumina HiSeq 4000
    6
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  • single-ended
    8
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    7
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  • 50
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  • DNA
    15
Lab
Selected filters:
Yin Shen, UCSF
  • Jesse Engreitz, Stanford
    270
  • Will Greenleaf, Stanford
    19
  • Yin Shen, UCSF
    15
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    11
  • Kevin White, UChicago
    9
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    6
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    2
Replication type
  • isogenic
    11
Audit category:
  • unreplicated experiment
    4
Audit category:
  • lacking processed data
    12
  • missing genetic modification reagents
    11
  • missing analysis_step_run
    3

Showing 15 of 15 results

Report
  • CRISPR disruption screen of WTC11
    Homo sapiens WTC11 genetically modified using CRISPR, transduction treated with 240 ng/mL tioguanine for 7 days
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Treatment: tioguanine (CHEBI:9555) for 7 days
    Functional Characterization Experiment
    ENCSR482PHH
    released
  • CRISPR disruption screen of WTC11
    Homo sapiens WTC11 genetically modified using CRISPR, transduction treated with 160 ng/mL tioguanine for 7 days
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Treatment: tioguanine (CHEBI:9555) for 7 days
    Functional Characterization Experiment
    ENCSR071ZGB
    released
  • CRISPR disruption screen of WTC11
    Homo sapiens WTC11 genetically modified using CRISPR, transduction treated with 80 ng/mL tioguanine for 7 days
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Treatment: tioguanine (CHEBI:9555) for 7 days
    Functional Characterization Experiment
    ENCSR117YGQ
    released
  • CRISPR interference screen of WTC11
    Homo sapiens WTC11 genetically modified using CRISPR, transduction treated with 240 ng/mL tioguanine for 7 days
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Treatment: tioguanine (CHEBI:9555) for 7 days
    Functional Characterization Experiment
    ENCSR793DSE
    released
  • CRISPR interference screen of WTC11
    Homo sapiens WTC11 genetically modified using CRISPR, transduction treated with 160 ng/mL tioguanine for 7 days
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Treatment: tioguanine (CHEBI:9555) for 7 days
    Functional Characterization Experiment
    ENCSR254SJU
    released
  • CRISPR interference screen of WTC11
    Homo sapiens WTC11 genetically modified using CRISPR, transduction treated with 80 ng/mL tioguanine for 7 days
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Treatment: tioguanine (CHEBI:9555) for 7 days
    Functional Characterization Experiment
    ENCSR900AXT
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR617AZY
    released
  • CRISPR disruption screen of F123
    Mus musculus Castaneus X S129/SvJae F123 genetically modified using CRISPR, transduction
    Target: Sox2
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR004TXD
    released
  • CRISPR disruption screen of F123
    Mus musculus Castaneus X S129/SvJae F123 genetically modified using CRISPR, transduction
    Target: Esrrb
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR063AQH
    released
  • CRISPR disruption screen of F123
    Mus musculus Castaneus X S129/SvJae F123 genetically modified using CRISPR, transduction
    Target: Sox2
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR897BBN
    released
  • CRISPR disruption screen of F123
    Mus musculus Castaneus X S129/SvJae F123 genetically modified using CRISPR, transduction
    Target: Esrrb
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR312ISP
    released
  • CRISPR disruption screen of F123
    Mus musculus Castaneus X S129/SvJae F123 genetically modified using CRISPR, transduction
    Target: Dppa2
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR552KGE
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR919NIR
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR215PWC
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR147EBW
    released
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