ENCODE
Home
Data
Functional Genomics data
Experiment search
Experiment matrix
ChIP-seq matrix
Human body map
Functional Characterization data
High-throughput assays
In vivo validation assays
Cloud Resources
AWS Open Data
Collections
RNA-protein interactions (ENCORE)
Epigenomes from four individuals (ENTEx)
Stem Cell Development Matrix (SESCC)
Human reference epigenomes
Mouse reference epigenomes
Mouse development matrix
Search by region
Publications
Encyclopedia
About
Visualize (SCREEN)
Annotation matrix
Search
Methods
Materials & Methods
Antibodies
Genome references
Assays and standards
File formats
Software tools
Pipelines
Data organization
Release policy
Schemas
Help
Using the portal
Cart
REST API
Citing ENCODE
FAQ
Project Overview
Collaborations
ENCODE workshops
About the DCC
Search
Clear Filters
With processed data
All data
Assay title
Selected filters:
Control CRISPR screen
CRISPR disruption screen
1
Status
released
1
Target category
chromatin remodeler
1
Target of assay
Selected filters:
Dppa2
Esrrb
2
Sox2
2
Dppa2
1
Organism
Selected filters:
Mus musculus
Mus musculus
1
Biosample classification
cell line
1
Biosample term name
F123
1
Organ
embryo
1
Cell
stem cell
1
Life stage
unknown
1
Project
ENCODE
1
RFA
ENCODE4
1
Available file types
fastq
1
Platform
Illumina HiSeq 4000
1
Run type
Selected filters:
single-ended
single-ended
1
Read length (nt)
50
1
Library material
DNA
1
Lab
Yin Shen, UCSF
1
Replication type
isogenic
1
Audit category:
lacking processed data
1
missing genetic modification reagents
1
Showing 1 of 1 results
Report
Download
{ ; }
Add all items to cart
CRISPR disruption screen
of F123
Mus musculus
Castaneus X S129/SvJae F123 genetically modified using CRISPR, transduction
Target:
Dppa2
Lab:
Yin Shen, UCSF
Project:
ENCODE
Functional Characterization Experiment
ENCSR552KGE
released
Audit warning
2