Showing 25 of 112 results
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- CRISPRi CRISPR screen in WTC11Homo sapiens WTC11, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Lab: Bing Ren, UCSDProject: ENCODE
- proliferation CRISPR screen in glutamatergic neuronHomo sapiens glutamatergic neuron, 14 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- proliferation CRISPR screen in neural progenitor cellHomo sapiens neural progenitor cell, 3 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- proliferation CRISPR screen in WTC11Homo sapiens WTC11, 0 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- CRISPRi proliferation screen in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in HCT116Homo sapiens HCT116, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in HCT116Homo sapiens HCT116, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in HCT116Homo sapiens HCT116, 0 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in HCT116Homo sapiens HCT116, 0 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE