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Showing 25 of 25 results

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2550100200
  • CRISPRi FACS screen in activated CD4-positive, CD25-positive, alpha-beta regulatory T cell with fluorescence activated cell sorting readout of Tnfrsf18
    Mus musculus strain Rosa26-LSL-dCas9-KRAB activated CD4-positive, CD25-positive, alpha-beta regulatory T cell genetically modified (CRISPRi) using CRISPR
    Elements selection method: accessible genome regions
    Tiling modality: peak tiling
    Lab: Tim Reddy, Duke
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR202QXN
    released
  • CRISPR cutting FACS screen of MYC locus in K562 with endogenous protein Sort-seq readout of MYC
    CRISPR screen targeting candidate CREs following FACS high
    Loci: MYC
    Tiling modality: peak tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR689CKC
    released
  • CRISPR cutting FACS screen of MYC locus in K562 with endogenous protein Sort-seq readout of MYC
    CRISPR screen targeting candidate CREs following FACS low
    Loci: MYC
    Tiling modality: peak tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR831DXR
    released
  • CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2
    Mus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Sox2, (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locus
    Elements selection method: DNase hypersensitive sites
    Loci: Sox2
    Tiling modality: peak tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR004TXD
    released
  • CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of Esrrb
    Mus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Esrrb, (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locus
    Elements selection method: DNase hypersensitive sites
    Loci: Esrrb
    Tiling modality: peak tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR063AQH
    released
  • CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2
    Mus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Sox2, (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locus
    Elements selection method: DNase hypersensitive sites
    Loci: Sox2
    Tiling modality: peak tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR897BBN
    released
  • CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of Esrrb
    Mus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Esrrb, (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locus
    Elements selection method: DNase hypersensitive sites
    Loci: Esrrb
    Tiling modality: peak tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR312ISP
    released
  • CRISPR cutting FACS screen of Dppa2 locus in F123 with endogenous protein Sort-seq readout of Dppa2
    Mus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Dppa2, (insertion) using transduction, using CRISPR cutting (sgRNA) for Dppa2 locus
    Elements selection method: DNase hypersensitive sites
    Loci: Dppa2
    Tiling modality: peak tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR552KGE
    released
  • CRISPR cutting FACS screen of FMR1 locus in glutamatergic neuron with endogenous protein Sort-seq readout of FMR1
    Homo sapiens glutamatergic neuron genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens FMR1, (insertion) using transduction, using CRISPR cutting (pgRNA) for FMR1 locus
    Loci: FMR1
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR562YXE
    released
  • CRISPR cutting FACS screen of APP locus in glutamatergic neuron with endogenous protein Sort-seq readout of APP
    Homo sapiens glutamatergic neuron genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens APP, (insertion) using transduction, using CRISPR cutting (pgRNA) for APP locus
    Loci: APP
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR952RDF
    released
  • CRISPR cutting FACS screen of SIN3A locus in glutamatergic neuron with endogenous protein Sort-seq readout of SIN3A
    Homo sapiens glutamatergic neuron genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens SIN3A, (insertion) using transduction, using CRISPR cutting (pgRNA) for SIN3A locus
    Loci: SIN3A
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR113CEG
    released
  • CRISPR cutting FACS screen of MECP2 locus in glutamatergic neuron with endogenous protein Sort-seq readout of MECP2
    Homo sapiens glutamatergic neuron genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens MECP2, (insertion) using transduction, using CRISPR cutting (pgRNA) for MECP2 locus
    Loci: MECP2
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR119JRG
    released
  • CRISPR cutting FACS screen of APP locus in glutamatergic neuron with endogenous protein Sort-seq readout of APP
    Homo sapiens glutamatergic neuron genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens APP, (insertion) using transduction, using CRISPR cutting (pgRNA) for APP locus
    Loci: APP
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR678GDA
    released
  • CRISPR cutting FACS screen of SIN3A locus in glutamatergic neuron with endogenous protein Sort-seq readout of SIN3A
    Homo sapiens glutamatergic neuron genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens SIN3A, (insertion) using transduction, using CRISPR cutting (pgRNA) for SIN3A locus
    Loci: SIN3A
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR750UIY
    released
  • CRISPR cutting FACS screen of FMR1 locus in WTC11 with endogenous protein Sort-seq readout of FMR1
    Homo sapiens WTC11 genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens FMR1, (insertion) using transduction, using CRISPR cutting (pgRNA) for FMR1 locus
    Loci: FMR1
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR669TMQ
    released
  • CRISPR cutting FACS screen of APP locus in WTC11 with endogenous protein Sort-seq readout of APP
    Homo sapiens WTC11 genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens APP, (insertion) using transduction, using CRISPR cutting (pgRNA) for APP locus
    Loci: APP
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR659YFO
    released
  • CRISPR cutting FACS screen of SIN3A locus in WTC11 with endogenous protein Sort-seq readout of SIN3A
    Homo sapiens WTC11 genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens SIN3A, (insertion) using transduction, using CRISPR cutting (pgRNA) for SIN3A locus
    Loci: SIN3A
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR662MTS
    released
  • CRISPR cutting FACS screen of MECP2 locus in WTC11 with endogenous protein Sort-seq readout of MECP2
    Homo sapiens WTC11 genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens MECP2, (insertion) using transduction, using CRISPR cutting (pgRNA) for MECP2 locus
    Loci: MECP2
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR250ZBY
    released
  • CRISPR cutting FACS screen of APP locus in WTC11 with endogenous protein Sort-seq readout of APP
    Homo sapiens WTC11 genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens APP, (insertion) using transduction, using CRISPR cutting (pgRNA) for APP locus
    Loci: APP
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR191ECR
    released
  • CRISPR cutting FACS screen of SIN3A locus in WTC11 with endogenous protein Sort-seq readout of SIN3A
    Homo sapiens WTC11 genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens SIN3A, (insertion) using transduction, using CRISPR cutting (pgRNA) for SIN3A locus
    Loci: SIN3A
    Tiling modality: full tiling
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR542MMN
    released
  • CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2
    Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locus
    Loci: Sox2
    Tiling modality: full tiling
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR500VLM
    released
  • CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of Esrrb
    Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locus
    Loci: Esrrb
    Tiling modality: full tiling
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR814OXH
    released
  • CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2
    Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locus
    Loci: Sox2
    Tiling modality: full tiling
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR473QRW
    released
  • CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of Esrrb
    Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locus
    Loci: Esrrb
    Tiling modality: full tiling
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR141PNN
    released
  • CRISPR cutting FACS screen of Dppa2 locus in F123 with endogenous protein Sort-seq readout of Dppa2
    Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Dppa2 locus
    Loci: Dppa2
    Tiling modality: full tiling
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR705PWZ
    released
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