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Assay title
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STARR-seq
STARR-seq
1
Status
released
1
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Organism
Homo sapiens
1
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Biosample classification
cell line
1
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Biosample term name
A549
1
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Organ
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lung
lung
1
Cell
cancer cell
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Life stage
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adult
adult
1
Biosample treatment
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dexamethasone
dexamethasone
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ENCODE
ENCODE
GGR
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RFA
GGR
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Available file types
fastq
1
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Platform
Illumina HiSeq 4000
1
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Run type
paired-ended
1
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Read length (nt)
51
1
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Library fragment size (nt)
>300
1
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Library material
RNA
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Lab
Tim Reddy, Duke
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Replication type
isogenic
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missing analysis_step_run
lacking processed data
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missing genetic modification reagents
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STARR-seq
of A549
Homo sapiens
A549 genetically modified using transient transfection
Lab:
Tim Reddy, Duke
Project:
GGR
Functional Characterization Experiment
ENCSR292EDU
released
Audit warning
2