Assay title
Selected filters:
CRISPR deletion screen
Status
Organism
Biosample classification
Biosample term name
Selected filters:
F123
Organ
Cell
Life stage
Selected filters:
adult
Biosample treatment
Project
RFA
Genome assembly
Available file types
Selected filters:
fastq
Platform
Selected filters:
Illumina HiSeq 4000
Run type
Read length (nt)
Library fragment size (nt)
Library material
Lab
Replication type
Audit category:

Showing 12 of 12 results

Report
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR617AZY
    released
  • growth-based CRISPR interference screen of NCI-H460
    Homo sapiens NCI-H460 genetically modified using CRISPR, transduction 14 days after the sample was treated with 2 μg/mL puromycin for 2 days, 0.2 μg/mL puromycin for 2 days
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Treatments: 2 μg/mL puromycin (CHEBI:17939) for 2 days, 0.2 μg/mL puromycin (CHEBI:17939) for 2 days
    Functional Characterization Experiment
    ENCSR515OUJ
    released
  • growth-based CRISPR interference screen of HepG2
    Homo sapiens HepG2 genetically modified using CRISPR, transduction 14 days after the sample was treated with 2 μg/mL puromycin for 2 days, 0.2 μg/mL puromycin for 2 days
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Treatments: 2 μg/mL puromycin (CHEBI:17939) for 2 days, 0.2 μg/mL puromycin (CHEBI:17939) for 2 days
    Functional Characterization Experiment
    ENCSR694XBP
    released
  • Control CRISPR screen of NCI-H460
    Homo sapiens NCI-H460 genetically modified using CRISPR, transduction 0 days after the sample was treated with 2 μg/mL puromycin for 2 days, 0.2 μg/mL puromycin for 2 days
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Treatments: 2 μg/mL puromycin (CHEBI:17939) for 2 days, 0.2 μg/mL puromycin (CHEBI:17939) for 2 days
    Functional Characterization Experiment
    ENCSR513PAU
    released
  • Control CRISPR screen of HepG2
    Homo sapiens HepG2 genetically modified using CRISPR, transduction 0 days after the sample was treated with 2 μg/mL puromycin for 2 days, 0.2 μg/mL puromycin for 2 days
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Treatments: 2 μg/mL puromycin (CHEBI:17939) for 2 days, 0.2 μg/mL puromycin (CHEBI:17939) for 2 days
    Functional Characterization Experiment
    ENCSR362QSD
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR772AWX
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Tim Reddy, Duke
    Project: GGR
    Functional Characterization Experiment
    ENCSR652MCH
    released
  • STARR-seq of SH-SY5Y
    Homo sapiens SH-SY5Y genetically modified using transient transfection
    Lab: Kevin White, UChicago
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR983SZZ
    released
  • STARR-seq of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Kevin White, UChicago
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR135NXN
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Kevin White, UChicago
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR024WBS
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Kevin White, UChicago
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR316NSE
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Kevin White, UChicago
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR002ZDU
    released