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Assay title
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CRISPR deletion screen
STARR-seq
1
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pooled clone sequencing
1
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Status
released
2
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Organism
Homo sapiens
1
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Biosample classification
cell line
1
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cloning host
1
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Biosample term name
A549
1
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DNA cloning sample
1
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Organ
lung
1
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Cell
cancer cell
1
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Life stage
adult
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Biosample treatment
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dexamethasone
dexamethasone
Project
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GGR
ENCODE
332
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GGR
2
RFA
GGR
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Available file types
fastq
2
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Platform
Illumina HiSeq 4000
2
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Run type
paired-ended
2
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Read length (nt)
51
2
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Library fragment size (nt)
>300
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Library material
DNA
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RNA
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Lab
Tim Reddy, Duke
2
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Replication type
isogenic
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Audit category:
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lacking processed data
lacking processed data
2
missing genetic modification reagents
1
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STARR-seq
of A549
Homo sapiens
A549 genetically modified using transient transfection
Lab:
Tim Reddy, Duke
Project:
GGR
Functional Characterization Experiment
ENCSR292EDU
released
Audit warning
2
pooled clone sequencing
of DNA cloning sample
Lab:
Tim Reddy, Duke
Project:
GGR
Functional Characterization Experiment
ENCSR652MCH
released
Audit warning
1