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CRISPR deletion screen
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Organism
Biosample classification
Biosample term name
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F123
Organ
Cell
Life stage
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adult
Biosample treatment
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RFA
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GGR
ENCODE4
Available file types
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fastq
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Read length (nt)
Library fragment size (nt)
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Audit category:
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lacking processed data

Showing 25 of 28 results

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  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR752EIG
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR360LZF
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transduction
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR932ZCL
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transduction
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR579XDB
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transduction
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR990ZAU
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transduction
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR742NIM
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transduction
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR468WFP
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transduction
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR902NRZ
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR335DOI
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR642ECM
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR118NBQ
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR547NTG
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR383FIW
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR974CHK
    released
  • Control MPRA of HepG2
    Homo sapiens HepG2 genetically modified using transient transfection
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR356YBY
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR192JMI
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR200NQW
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR638VYO
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR617AZY
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR919NIR
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR215PWC
    released
  • pooled clone sequencing of DNA cloning sample
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR147EBW
    released
  • growth-based CRISPR interference screen of NCI-H460
    Homo sapiens NCI-H460 genetically modified using CRISPR, transduction 14 days after the sample was treated with 2 μg/mL puromycin for 2 days, 0.2 μg/mL puromycin for 2 days
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Treatments: 2 μg/mL puromycin (CHEBI:17939) for 2 days, 0.2 μg/mL puromycin (CHEBI:17939) for 2 days
    Functional Characterization Experiment
    ENCSR515OUJ
    released
  • growth-based CRISPR interference screen of HepG2
    Homo sapiens HepG2 genetically modified using CRISPR, transduction 14 days after the sample was treated with 2 μg/mL puromycin for 2 days, 0.2 μg/mL puromycin for 2 days
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Treatments: 2 μg/mL puromycin (CHEBI:17939) for 2 days, 0.2 μg/mL puromycin (CHEBI:17939) for 2 days
    Functional Characterization Experiment
    ENCSR694XBP
    released
  • Control CRISPR screen of NCI-H460
    Homo sapiens NCI-H460 genetically modified using CRISPR, transduction 0 days after the sample was treated with 2 μg/mL puromycin for 2 days, 0.2 μg/mL puromycin for 2 days
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Treatments: 2 μg/mL puromycin (CHEBI:17939) for 2 days, 0.2 μg/mL puromycin (CHEBI:17939) for 2 days
    Functional Characterization Experiment
    ENCSR513PAU
    released