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Assay category
6
Transcription
Assay
6
single cell RNA-seq
Project
6
ENCODE
RFA
6
ENCODE3
Experiment status
6
released
Genome assembly (visualization)
449
ce11
419
ce10
400
dm6
358
dm3
55
mm9
6
mm10
Organism
6
Mus musculus
Target of assay
719
histone
719
histone modification
377
broad histone mark
339
narrow histone mark
178
transcription factor
23
chromatin remodeller
6
control
6
other context
6
other post-translational modification
1
RNA binding protein
Biosample type
3
primary cell
3
tissue
Organ
5
brain
Life stage
6
adult
Available data
6
bam
6
bigWig
6
fastq
6
tsv
Platform
6
Illumina HiSeq 2500
2
Illumina HiSeq 2000
Run type
6
single-ended
Read length (nt)
6
100
Library insert size (nt)
6
>200
Library made from
6
RNA
Date released
3
December, 2014
2
October, 2015
1
July, 2015
Date Submitted
4
2014-12-16
2
2015-06-26
Lab
6
Barbara Wold, Caltech
Replication type
6
isogenic
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
Showing 6 of 6 results
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Experiment
ENCSR822EWO
released
single cell RNA-seq
of cerebellar granule layer
Mus musculus
C57BL/6JxCAST/EiJ cerebellar granule layer male adult (14 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR805QYO
released
single cell RNA-seq
of Purkinje cell
Mus musculus
C57BL/6JxCAST/EiJ Purkinje cell male adult (14 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR236EGS
released
single cell RNA-seq
of cerebral cortex, layer 5
Mus musculus
C57BL/6 cerebral cortex, layer 5 male adult (8 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR268AXN
released
single cell RNA-seq
of pyramidal neuron
Mus musculus
C57BL/6 pyramidal neuron male adult (8 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR814JMM
released
single cell RNA-seq
of cerebellar granule layer
Mus musculus
C57BL/6 cerebellar granule layer male adult (8 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR758TAD
released
single cell RNA-seq
of Purkinje cell
Mus musculus
C57BL/6 Purkinje cell male adult (8 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE