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Transcription
6
Assay
single cell RNA-seq
6
Experiment status
released
6
Project
ENCODE
6
RFA
ENCODE3
6
Genome assembly (visualization)
ce11
474
ce10
419
dm6
412
dm3
358
mm9
55
mm10
6
Organism
Mus musculus
6
Target of assay
histone
719
broad histone mark
377
narrow histone mark
339
transcription factor
178
chromatin remodeller
23
control
6
other context
6
other post-translational modification
6
RNA binding protein
1
Biosample type
primary cell
3
tissue
3
Organ
brain
5
Life stage
adult
6
Available data
bam
6
bigWig
6
fastq
6
tsv
6
Platform
Illumina HiSeq 2500
6
Illumina HiSeq 2000
2
Run type
single-ended
6
Read length (nt)
100
6
Library insert size (nt)
>200
6
Library made from
RNA
6
Date released
December, 2014
3
October, 2015
2
July, 2015
1
Date Submitted
2014-12-16
4
2015-06-26
2
Lab
Barbara Wold, Caltech
6
Replication type
isogenic
6
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
Showing 6 of 6 results
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Experiment
ENCSR822EWO
released
single cell RNA-seq
of cerebellar granule layer
Mus musculus
C57BL/6JxCAST/EiJ cerebellar granule layer male adult (14 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR805QYO
released
single cell RNA-seq
of Purkinje cell
Mus musculus
C57BL/6JxCAST/EiJ Purkinje cell male adult (14 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR236EGS
released
single cell RNA-seq
of cerebral cortex, layer 5
Mus musculus
C57BL/6 cerebral cortex, layer 5 male adult (8 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR268AXN
released
single cell RNA-seq
of pyramidal neuron
Mus musculus
C57BL/6 pyramidal neuron male adult (8 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR814JMM
released
single cell RNA-seq
of cerebellar granule layer
Mus musculus
C57BL/6 cerebellar granule layer male adult (8 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE
Experiment
ENCSR758TAD
released
single cell RNA-seq
of Purkinje cell
Mus musculus
C57BL/6 Purkinje cell male adult (8 months)
Target:
Control
Lab:
Barbara Wold, Caltech
Project:
ENCODE