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Clear Filters
Assay category
5
DNA accessibility
Assay
5
DNase-seq
Project
5
ENCODE
RFA
3
ENCODE2-Mouse
2
ENCODE3
Experiment status
5
released
Genome assembly (visualization)
4
mm10
Organism
Homo sapiens
5
Mus musculus
Biosample type
4
tissue
1
primary cell
Organ
445
brain
390
embryo
145
liver
142
heart
111
spleen
105
limb
83
epithelium
79
blood
79
bodily fluid
77
intestine
77
lung
75
kidney
68
lymph node
63
stomach
51
musculature of body
36
gonad
34
connective tissue
31
bone element
31
bone marrow
23
adipose tissue
18
testis
18
thymus
13
small intestine
12
ovary
8
mouth
7
extraembryonic component
6
large intestine
6
placenta
5
eye
4
adrenal gland
4
urinary bladder
3
skin of body
2
spinal cord
1
breast
1
mammary gland
1
pancreas
Life stage
3
postnatal
1
adult
1
embryonic
Available data
5
bam
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
5
bigWig
5
fastq
Platform
5
Illumina HiSeq 2000
1
Illumina HiSeq 2500
1
Illumina NextSeq 500
Run type
3
single-ended
2
paired-ended
Read length (nt)
5
36
Library made from
5
DNA
Date released
2
September, 2012
2
September, 2015
1
November, 2012
Date Submitted
1
2015-09-30
1
2016-08-01
Lab
5
John Stamatoyannopoulos, UW
Replication type
3
unreplicated
2
isogenic
Audit category:
2
low read depth
2
low spot score
target.investigated_as!
recombinant protein
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
Showing 5 of 5 results
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Experiment
ENCSR488VEQ
released
Audit warning
1
DNase-seq
of retina
Mus musculus
C57BL/6 retina embryo (14.5 days)
Lab:
John Stamatoyannopoulos, UW
Project:
ENCODE
Experiment
ENCSR666HFH
released
DNase-seq
of Muller cell
Mus musculus
C57BL/6 Muller cell postnatal (12 days)
Lab:
John Stamatoyannopoulos, UW
Project:
ENCODE
Experiment
ENCSR000CNV
released
DNase-seq
of retina
Mus musculus
C57BL/6 retina male postnatal (1 day)
Lab:
John Stamatoyannopoulos, UW
Project:
ENCODE
Experiment
ENCSR000CNW
released
Audit warning
2
DNase-seq
of retina
Mus musculus
C57BL/6 retina male adult (8 weeks)
Lab:
John Stamatoyannopoulos, UW
Project:
ENCODE
Experiment
ENCSR000CNU
released
Audit warning
1
DNase-seq
of retina
Mus musculus
C57BL/6 retina male postnatal (7 days)
Lab:
John Stamatoyannopoulos, UW
Project:
ENCODE