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Assay category
DNA sequencing
1
Assay
ChIP-seq
3082
polyA RNA-seq
389
total RNA-seq
162
RNA Bind-n-Seq
161
DNase-seq
106
ATAC-seq
90
single cell RNA-seq
79
microRNA-seq
78
microRNA counts
77
siRNA RNA-seq
59
CAGE
43
small RNA-seq
38
PAS-seq
34
RIP-seq
30
Repli-chip
18
Repli-seq
15
whole genome sequencing assay
3
5' RLM RACE
2
MRE-seq
2
MeDIP-seq
2
Circulome-seq
1
RNA microarray
1
Experiment status
released
1
Project
community
1
RFA
community
1
Organism
Caenorhabditis elegans
1
Biosample type
whole organisms
1
Life stage
mixed stage (embryonic)
1
Available data
fastq
1
Platform
Illumina MiSeq
1
Run type
paired-ended
1
Read length (nt)
76
1
Library made from
DNA
1
Date released
January, 2018
1
Date Submitted
2017-08-17
1
Lab
Andrew Z. Fire, Stanford
1
Replication type
unreplicated
1
Audit category:
missing external identifiers
1
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
lab.title!
Joe Ecker, Salk
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Experiment
ENCSR289XJB
released
Audit warning
1
Circulome-seq
of whole organism
Caenorhabditis elegans
strain VC2010 (WT) whole organism mixed stage (embryo)
Lab:
Andrew Z. Fire, Stanford
Project:
community