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Clear Filters
Data Type
6
Dataset
6
ReferenceEpigenome
6
Series
Audit category:
62
mild to moderate bottlenecking
57
low read length
29
low read depth
25
inconsistent platforms
25
moderate library complexity
21
insufficient read depth
19
antibody characterized with exemption
16
inconsistent control read length
14
inconsistent control run_type
10
control low read depth
10
low spot score
6
mixed read lengths
6
partial reference epigenome
4
low replicate concordance
4
mixed run types
1
missing spikeins
1
multiple biosample term names in reference epigenome
Showing 6 of 6 results
Series
ENCSR856EKB
released
Audit warning
1
Reference epigenome series
in foreskin fibroblast
(
Homo sapiens
, newborn
)
Targets:
H3K27me3, Methylcytidine, H3K4me1, H3K36me3, H3K27ac, H3K9me3, Control
Lab:
Anshul Kundaje, Stanford
Project:
Roadmap
Series
ENCSR271ULX
released
Audit warning
1
Reference epigenome series
in fibroblast of dermis
(
Homo sapiens
, adult
)
Targets:
H3K27me3, H3K4me1, H3K36me3, H3K27ac, H3K9me3, Control, H3K4me3
Lab:
ENCODE Consortium
Project:
ENCODE
Series
ENCSR300AUZ
released
Audit warning
1
Reference epigenome series
in fibroblast of arm
(
Homo sapiens
, adult, 53 year
)
Targets:
H3K27me3, H3K4me1, H3K36me3, H3K27ac, Control, H3K4me3
Lab:
ENCODE Consortium
Project:
ENCODE
Series
ENCSR628CIH
archived
Audit warning
1
Reference epigenome series
in keratinocyte
(
Homo sapiens
)
Targets:
H3K27me3, H3K4me1, H3K9me1, H3K36me3, H3K27ac, H3K9me3, Control, H3K4me2, H3K9ac, H3K79me2, H2AFZ, H3K4me3, H4K20me1
Lab:
Anshul Kundaje, Stanford
Project:
Roadmap
Series
ENCSR377TON
archived
Audit warning
2
Reference epigenome series
(
Homo sapiens
)
Targets:
H3K27me3, H3K4me1, H3K36me3, H3K27ac, H3K9me3, Control, H3K4me2, H3K9ac, H3K79me2, H2AFZ, H3K4me3, H4K20me1
Lab:
Anshul Kundaje, Stanford
Project:
Roadmap
Series
ENCSR193SZM
released
Audit warning
1
Reference epigenome series
in keratinocyte
(
Homo sapiens
)
Targets:
H3K27me3, H3K4me1, H3K36me3, H3K27ac, H3K9me3, Control, H3K4me3
Lab:
ENCODE Consortium
Project:
ENCODE