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Audit category:
  • 62mild to moderate bottlenecking
  • 57low read length
  • 29low read depth
  • 25inconsistent platforms
  • 25moderate library complexity
  • 21insufficient read depth
  • 19antibody characterized with exemption
  • 16inconsistent control read length
  • 14inconsistent control run_type
  • 10control low read depth
  • 10low spot score
  • 6mixed read lengths
  • 6partial reference epigenome
  • 4low replicate concordance
  • 4mixed run types
  • 1missing spikeins
  • 1multiple biosample term names in reference epigenome

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  • Series

    ENCSR377TON

    archived

    Reference epigenome series (Homo sapiens)
    Targets: H3K27me3, H3K4me1, H3K36me3, H3K27ac, H3K9me3, Control, H3K4me2, H3K9ac, H3K79me2, H2AFZ, H3K4me3, H4K20me1
    Lab: Anshul Kundaje, Stanford
    Project: Roadmap
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