Toggle navigation
ENCODE
Data
Matrix
Search
Search by region
Reference epigenomes
Publications
Encyclopedia
About
Matrix
Search
Materials & Methods
Antibodies
Biosamples
Genome references
Standards and guidelines
Ontologies
File formats
Software tools
Pipelines
Release policy
Data access
Help
Getting started
REST API
Project overview
Tutorials
News
Acknowledgements
Contact
Clear Filters
Data Type
4
Dataset
4
Experiment
Audit category:
2
insufficient read length
Audit category:
62
mild to moderate bottlenecking
57
low read length
29
low read depth
25
inconsistent platforms
25
moderate library complexity
21
insufficient read depth
19
antibody characterized with exemption
16
inconsistent control read length
14
inconsistent control run_type
10
control low read depth
10
low spot score
6
mixed read lengths
6
partial reference epigenome
4
low replicate concordance
4
mixed run types
1
missing spikeins
1
multiple biosample term names in reference epigenome
Showing 4 of 4 results
Experiment
ENCSR000AGA
released
Audit warning
1
small RNA-seq
of skin of body
Homo sapiens
skin of body female fetal (24 weeks) and male fetal (22 weeks)
Lab:
Thomas Gingeras, CSHL
Project:
ENCODE
Experiment
ENCSR000CRG
released
Audit not_compliant
1
Audit warning
2
small RNA-seq
of foreskin fibroblast
Homo sapiens
foreskin fibroblast male newborn
Lab:
Thomas Gingeras, CSHL
Project:
ENCODE
Experiment
ENCSR489KNQ
released
Audit warning
2
small RNA-seq
of fibroblast of arm
Homo sapiens
fibroblast of arm male adult (53 years)
Lab:
Thomas Gingeras, CSHL
Project:
ENCODE
Experiment
ENCSR000CRU
released
Audit not_compliant
1
Audit warning
2
small RNA-seq
of keratinocyte
Homo sapiens
keratinocyte nuclear fraction female
Lab:
Thomas Gingeras, CSHL
Project:
ENCODE