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Showing results 1 to 25 of 22485
| ID | Accession | Assay name | Assay title | Target | Target of assay | Target gene symbol | Biosample summary | Biosample term name | Dbxrefs | Description | Lab | Project | Status | Files | Related series | Biosample accession | Biological replicate | Technical replicate | Linked antibody | Organism | Life stage | Biosample age | Biosample treatment | Biosample treatment ontology ID | Biosample treatment amount | Biosample treatment amount units | Biosample treatment duration | Biosample treatment duration units | Synchronization | Post-synchronization time | Post-synchronization time units | Biosample modification site target organism | Biosample modification site introduced gene organism | Replicates | Mixed biosamples | Cellular component | Library construction platform | Library construction method |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENCSR018FXD | ENCSR018FXD | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST kidney tissue female (11 months) | kidney | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF459BOX, ENCFF944VQR, ENCFF309OUG, ENCFF495VGJ, ENCFF874ZCN, ENCFF904HOB, ENCFF256LWZ, ENCFF724ACZ, ENCFF529IOF, ENCFF859XUH, ENCFF588GRX, ENCFF396IZJ, ENCFF353CVJ, ENCFF647PKS, ENCFF051ZGW, ENCFF613GQB | ENCBS168MFN | 1 | 1 | Mus musculus | unknown | 11 months | /replicates/5831eaf5-3a2f-4ed4-8ca0-a593184408a8/ | ||||||||||||||||||||||
| ENCSR352FCL | ENCSR352FCL | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST kidney tissue male (9 months) | kidney | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF321UDU, ENCFF010FQR, ENCFF378OPN, ENCFF240DFP, ENCFF822SVW, ENCFF251POG, ENCFF535KPP, ENCFF831LIU, ENCFF918ALV, ENCFF301AOF, ENCFF074TJG, ENCFF273SJR, ENCFF867PQI, ENCFF102NFJ, ENCFF473DRI, ENCFF284YAK | ENCBS105BQU | 1 | 1 | Mus musculus | unknown | 9 months | /replicates/830b41c0-2352-4ca4-9594-6fbdb95b727a/ | ||||||||||||||||||||||
| ENCSR291KQU | ENCSR291KQU | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J kidney tissue female (9 months) | kidney | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF733IED, ENCFF629YTZ, ENCFF650SOK, ENCFF327LRW, ENCFF032KKJ, ENCFF333LXO, ENCFF399SCI, ENCFF320EUD, ENCFF391WBY, ENCFF973NBK, ENCFF394JDL, ENCFF677QBZ, ENCFF204XXW, ENCFF593QJC, ENCFF687SUV, ENCFF078IWC, ENCFF465YQH, ENCFF717ITE | ENCBS439NGT | 1 | 1 | Mus musculus | unknown | 9 months | /replicates/ac6350aa-9914-488e-b536-c8ad1f6aeaab/ | ||||||||||||||||||||||
| ENCSR021NVL | ENCSR021NVL | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST layer of hippocampus tissue male (11-12 months) | layer of hippocampus | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF314SOH, ENCFF976WHO, ENCFF614JVN, ENCFF269LMF, ENCFF251PRV, ENCFF777BOW, ENCFF237BLP, ENCFF527ZZG, ENCFF606DFD, ENCFF692SUQ, ENCFF489MPG, ENCFF685UNM, ENCFF517XNC, ENCFF924LMV, ENCFF340KUD, ENCFF635OQA | ENCBS768VWT | 1 | 1 | Mus musculus | unknown | 11-12 months | /replicates/391f6ad3-a065-4512-98a1-7f2b765faa58/ | ||||||||||||||||||||||
| ENCSR529QVB | ENCSR529QVB | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST layer of hippocampus tissue male (9-11 months) | layer of hippocampus | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF995GGE, ENCFF777NBP, ENCFF766HOL, ENCFF336UMG, ENCFF642AGA, ENCFF635CAM, ENCFF069IKE, ENCFF998JYI, ENCFF254MUL, ENCFF964OQT, ENCFF113ROR, ENCFF510BWY, ENCFF037IBF, ENCFF426GNR, ENCFF189LKO, ENCFF488IGK | ENCBS572EPH | 1 | 1 | Mus musculus | unknown | 9-11 months | /replicates/2ed696ea-c290-462e-8437-aada38f6d5a4/ | ||||||||||||||||||||||
| ENCSR154CWQ | ENCSR154CWQ | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J layer of hippocampus tissue female (9-10 months) | layer of hippocampus | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF760ALR, ENCFF528RPQ, ENCFF709MUH, ENCFF846HJU, ENCFF727JZB, ENCFF097ASE, ENCFF518DUI, ENCFF542SXB, ENCFF588YKF, ENCFF786CSG, ENCFF963TWC, ENCFF537XGE, ENCFF908OFT, ENCFF518XDY, ENCFF517PGY, ENCFF468QJL | ENCBS558DJW | 1 | 1 | Mus musculus | unknown | 9-10 months | /replicates/15a7ade7-4f7c-4037-a461-bbc627c17367/ | ||||||||||||||||||||||
| ENCSR581XCY | ENCSR581XCY | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J layer of hippocampus tissue male (8-10 months) | layer of hippocampus | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF503QTW, ENCFF674EXM, ENCFF234ZEW, ENCFF722UJE, ENCFF997IAZ, ENCFF877AEF, ENCFF011WOK, ENCFF638KIW, ENCFF780GDK, ENCFF349FGO, ENCFF690YKK, ENCFF778YDV, ENCFF207XJB, ENCFF313OFH, ENCFF494JWP, ENCFF483MNN, ENCFF653HIV, ENCFF610ZEC, ENCFF585QDA, ENCFF421KLY, ENCFF793SPL, ENCFF615NXI, ENCFF434FOP, ENCFF037QLU, ENCFF623JVZ, ENCFF330ACQ, ENCFF579QRO, ENCFF640HWW, ENCFF880TPC, ENCFF184GHG, ENCFF383CVQ, ENCFF441WND | ENCBS805PPZ, ENCBS615CKD | 1, 2 | 1 | Mus musculus | unknown | 8-10 months | /replicates/42c0044f-ddaa-4dd0-8cff-747374048a91/, /replicates/a463cf46-58d7-4efe-8a55-098eafe69de5/ | ||||||||||||||||||||||
| ENCSR315NES | ENCSR315NES | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J layer of hippocampus tissue female (8-10 months) | layer of hippocampus | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF095GQO, ENCFF344GMP, ENCFF349AYT, ENCFF636VNX, ENCFF068NWL, ENCFF900MHN, ENCFF033EZH, ENCFF707VYY, ENCFF776SUU, ENCFF669ZGE, ENCFF334ZBU, ENCFF852MUY, ENCFF137FDD, ENCFF225VBG, ENCFF529AVS, ENCFF042NOW, ENCFF894IQB, ENCFF970ZGZ, ENCFF266WXI, ENCFF888YWK, ENCFF251KFH, ENCFF676MVZ, ENCFF511SYV, ENCFF872BTP, ENCFF213GSD, ENCFF245NBN, ENCFF525VAG, ENCFF508IVV, ENCFF719MJS, ENCFF768UKA, ENCFF478GIW, ENCFF095YTI, ENCFF173JQA, ENCFF243YBH | ENCBS101NOF, ENCBS581NAA | 1, 2 | 1 | Mus musculus | unknown | 8-10 months | /replicates/97446d7e-81c6-4cd2-8c9f-8b442eb7914f/, /replicates/0a4ba9ba-c4e2-447d-a624-0bccf672bb04/ | ||||||||||||||||||||||
| ENCSR944NVO | ENCSR944NVO | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J heart tissue female (11 months) | heart | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF339FBT, ENCFF653WHL, ENCFF310AAM, ENCFF649ZXD, ENCFF442YZR, ENCFF194HUA, ENCFF897FEB, ENCFF242WZR, ENCFF649WXL, ENCFF886CBI, ENCFF849BBT, ENCFF737EMX, ENCFF461KCG, ENCFF449GDJ, ENCFF588ORB, ENCFF720HGX | ENCBS936UFV | 1 | 1 | Mus musculus | unknown | 11 months | /replicates/ef69ea33-d5a7-4e68-8406-c35ce355d8bd/ | ||||||||||||||||||||||
| ENCSR613LJB | ENCSR613LJB | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST heart tissue male (9 months) | heart | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF104RAL, ENCFF093IAK, ENCFF286OGY, ENCFF468NHC, ENCFF714ZGK, ENCFF680GRX, ENCFF497BWC, ENCFF088NNN, ENCFF849JWF, ENCFF524TUU, ENCFF415WZL, ENCFF202EXQ, ENCFF949NIG, ENCFF520GXC, ENCFF241RMG, ENCFF122DJK | ENCBS851XAM | 1 | 1 | Mus musculus | unknown | 9 months | /replicates/181cc61d-284c-4ad7-ab9c-53cc1d8a74ac/ | ||||||||||||||||||||||
| ENCSR800YHA | ENCSR800YHA | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J heart tissue female (9 months) | heart | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF912TXA, ENCFF235UAK, ENCFF966MVL, ENCFF875FVC, ENCFF700BUQ, ENCFF523HUO, ENCFF567LYA, ENCFF857XNS, ENCFF776XVK, ENCFF433WXA, ENCFF298GED, ENCFF640FTM, ENCFF691TQG, ENCFF575EQF, ENCFF625QAA, ENCFF574XCG | ENCBS104DII | 1 | 1 | Mus musculus | unknown | 9 months | /replicates/df66c3cb-294b-423a-8dc9-bd2bebfb35df/ | ||||||||||||||||||||||
| ENCSR538SKV | ENCSR538SKV | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST left cerebral cortex tissue male (11 months) | left cerebral cortex | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF762XXQ, ENCFF069AXV, ENCFF908YIX, ENCFF405HKB, ENCFF894TPV, ENCFF675JKE, ENCFF693DSQ, ENCFF335XTE, ENCFF904KLX, ENCFF691NBX, ENCFF679MGO, ENCFF525UAB, ENCFF751WWO, ENCFF210YSV, ENCFF206HCD, ENCFF702ZDP | ENCBS954UZH | 1 | 1 | Mus musculus | unknown | 11 months | /replicates/112678a6-3d2a-49b7-8118-17aad884421a/ | ||||||||||||||||||||||
| ENCSR471DVS | ENCSR471DVS | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST left cerebral cortex tissue male (9 months) | left cerebral cortex | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF946IXC, ENCFF202DPF, ENCFF457GGM, ENCFF080PTQ, ENCFF119LXE, ENCFF880LJN, ENCFF781JYF, ENCFF116LPY, ENCFF220MVN, ENCFF519MXT, ENCFF320COI, ENCFF519FJM, ENCFF272XPG, ENCFF751AUO, ENCFF978NLM, ENCFF025VLY | ENCBS156LPB | 1 | 1 | Mus musculus | unknown | 9 months | /replicates/2b4c471f-71f7-4156-89ed-cf7e5510fc72/ | ||||||||||||||||||||||
| ENCSR098GIZ | ENCSR098GIZ | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J left cerebral cortex tissue female (9 months) | left cerebral cortex | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF778NDB, ENCFF988KGZ, ENCFF410FDT, ENCFF104MJO, ENCFF452MNI, ENCFF325CUV, ENCFF041DVC, ENCFF549XLA, ENCFF323UVI, ENCFF780JAS, ENCFF427DPK, ENCFF998KRY, ENCFF216BMW, ENCFF113JNW, ENCFF597VNG, ENCFF523FUC | ENCBS682AVR | 1 | 1 | Mus musculus | unknown | 9 months | /replicates/8193ce1e-19fa-4dfb-b8e6-815c47b2add5/ | ||||||||||||||||||||||
| ENCSR336MBU | ENCSR336MBU | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST cerebellum tissue male (11-12 months) | cerebellum | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF610QDF, ENCFF374YVY, ENCFF854BIV, ENCFF404NOD, ENCFF070QCJ, ENCFF212NZX, ENCFF670ZXL, ENCFF492IIA, ENCFF945LZZ, ENCFF791BWN, ENCFF335RBT, ENCFF591JJJ, ENCFF362HNH, ENCFF722EAO, ENCFF368MHR, ENCFF036CDP | ENCBS989NWY | 1 | 1 | Mus musculus | unknown | 11-12 months | /replicates/d0cd5f14-ff13-4197-832e-b3529d6412ae/ | ||||||||||||||||||||||
| ENCSR502NYH | ENCSR502NYH | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST cerebellum tissue male (9-11 months) | cerebellum | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF523KQN, ENCFF039GQT, ENCFF227QSK, ENCFF872ESM, ENCFF521ROR, ENCFF313BUP, ENCFF289JPE, ENCFF786CXL, ENCFF054WZB, ENCFF412JYI, ENCFF168OTX, ENCFF592QKW, ENCFF994BZL, ENCFF393RKS, ENCFF085WQF, ENCFF930WLW | ENCBS684OHZ | 1 | 1 | Mus musculus | unknown | 9-11 months | /replicates/ab7e8e86-9862-4457-adfb-f8e3e7c1a3b5/ | ||||||||||||||||||||||
| ENCSR671GDA | ENCSR671GDA | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J cerebellum tissue female (9-10 months) | cerebellum | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF849ONU, ENCFF321JMG, ENCFF405TVG, ENCFF412KDV, ENCFF942QRN, ENCFF392XOE, ENCFF911OLC, ENCFF197AOC, ENCFF407UTM, ENCFF352JXH, ENCFF516GZX, ENCFF917MXK, ENCFF203JVB, ENCFF038RWM, ENCFF526TKA, ENCFF507EHT | ENCBS525ZQK | 1 | 1 | Mus musculus | unknown | 9-10 months | /replicates/f56e8bcd-7472-40a9-a5e7-1f1e2267d0de/ | ||||||||||||||||||||||
| ENCSR335MHR | ENCSR335MHR | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J cerebellum tissue female (11 months) | cerebellum | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF924NUH, ENCFF716SGI, ENCFF888CSS, ENCFF689TDH, ENCFF666QYT, ENCFF625CFR, ENCFF231GAX, ENCFF389BUY, ENCFF273HVK, ENCFF518GSD, ENCFF580UVX, ENCFF781VCS, ENCFF658GDX, ENCFF792BOP, ENCFF546UIU, ENCFF971KDX | ENCBS437UZX | 1 | 1 | Mus musculus | unknown | 11 months | /replicates/449c25b6-6d66-45cb-a5bc-600c1b676b10/ | ||||||||||||||||||||||
| ENCSR934ECT | ENCSR934ECT | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J cerebellum tissue male (8-10 months) | cerebellum | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF671XGU, ENCFF728TDM, ENCFF150FPG, ENCFF452PIC, ENCFF061KNF, ENCFF947MQP, ENCFF316NGC, ENCFF887LZF, ENCFF602IRZ, ENCFF612UBS, ENCFF682GXC, ENCFF777BKD, ENCFF885QMV, ENCFF766VZS, ENCFF898FIZ, ENCFF635PMW, ENCFF623CSS, ENCFF496HWH, ENCFF494WEL, ENCFF809FAO, ENCFF857EGT, ENCFF966GNV, ENCFF167FWE, ENCFF041APK, ENCFF247LYW, ENCFF507XNG, ENCFF122GMZ, ENCFF234FHO, ENCFF839ZNF, ENCFF855KXD, ENCFF877KSE, ENCFF247DIQ | ENCBS901TDV, ENCBS579QDL | 1, 2 | 1 | Mus musculus | unknown | 8-10 months | /replicates/9393890d-0ca6-4263-a4bf-750ddde95861/, /replicates/817099f1-4555-452e-ba9a-ca46d9e767b1/ | ||||||||||||||||||||||
| ENCSR639CNY | ENCSR639CNY | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J cerebellum tissue female (8-10 months) | cerebellum | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF976PAH, ENCFF975NVZ, ENCFF427LEV, ENCFF495VRK, ENCFF452CMZ, ENCFF601TYN, ENCFF117COV, ENCFF490IFD, ENCFF309QNO, ENCFF055QYD, ENCFF053YIT, ENCFF224OOS, ENCFF574OGH, ENCFF724BCB, ENCFF941TYL, ENCFF009QTI, ENCFF816MSF, ENCFF633TXX, ENCFF559YKZ, ENCFF349LWA, ENCFF211CSD, ENCFF564BPM, ENCFF510IDQ, ENCFF214CMD, ENCFF498IVV, ENCFF975TAV, ENCFF856SZX, ENCFF308GWF, ENCFF063DFD, ENCFF948OWN, ENCFF441POE, ENCFF552API | ENCBS796RXY, ENCBS776BLV | 1, 2 | 1 | Mus musculus | unknown | 8-10 months | /replicates/83af3992-9805-4b6b-b522-109c42c54e2e/, /replicates/1a68b159-63a4-4d07-9388-bc05548d9783/ | ||||||||||||||||||||||
| ENCSR632BLV | ENCSR632BLV | DNase-seq | DNase-seq | Mus musculus strain 5xFAD/CAST adrenal gland tissue male (9-12 months) and male (9-13 months) | adrenal gland | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF902VKC, ENCFF689ONP, ENCFF303QXD, ENCFF779IWX, ENCFF541TUT, ENCFF520OFH, ENCFF285AUG, ENCFF505IPV, ENCFF255YKN, ENCFF299WBU, ENCFF437AKM, ENCFF589GPZ, ENCFF365PTR, ENCFF874RVZ, ENCFF375QPY, ENCFF144NLZ, ENCFF542JUD, ENCFF625SQE, ENCFF918YUE, ENCFF353ZXH, ENCFF327HED, ENCFF253PEM, ENCFF455RZZ, ENCFF040RKO, ENCFF940GXI, ENCFF630VYF, ENCFF626MMT, ENCFF859HWQ, ENCFF902DKJ, ENCFF058HLB, ENCFF581RDH, ENCFF365TRE | ENCBS836XYC, ENCBS817CNT | 1, 2 | 1 | Mus musculus | unknown | 9-12 months, 9-13 months | /replicates/f48be7c5-7d99-4bff-96ae-6f848939ea9e/, /replicates/00316bf3-1261-4950-bfb9-12fb27893d75/ | ||||||||||||||||||||||
| ENCSR551FWJ | ENCSR551FWJ | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J adrenal gland tissue male (8-10 months) | adrenal gland | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF975ABO, ENCFF792RVZ, ENCFF323VPU, ENCFF197DDJ, ENCFF770OYD, ENCFF425GJA, ENCFF950AOY, ENCFF046IEQ, ENCFF377FSM, ENCFF976CWC, ENCFF324BEV, ENCFF728FME, ENCFF558GSM, ENCFF549XLO, ENCFF451HRX, ENCFF281TTK, ENCFF327BIW, ENCFF794JAU, ENCFF683NEO, ENCFF603ORF, ENCFF757JWF, ENCFF543MPS, ENCFF466OYU, ENCFF392QTG, ENCFF543VSE, ENCFF349OWZ, ENCFF028REI, ENCFF335YPI, ENCFF222YDX, ENCFF214YMM, ENCFF237CRY, ENCFF808RBB | ENCBS688CXG, ENCBS497OCW | 1, 2 | 1 | Mus musculus | unknown | 8-10 months | /replicates/575c3dab-461f-43f2-bf11-4003a2a0df50/, /replicates/b636372a-61d0-44ea-959b-b50b47d6a7aa/ | ||||||||||||||||||||||
| ENCSR667KPL | ENCSR667KPL | DNase-seq | DNase-seq | Mus musculus strain B6CASTF1/J adrenal gland tissue female (8-10 months) | adrenal gland | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF638YVZ, ENCFF705ZIK, ENCFF368HTZ, ENCFF084YBE, ENCFF545MTQ, ENCFF470NLQ, ENCFF668YQL, ENCFF087WTJ, ENCFF305XKJ, ENCFF382GRO, ENCFF725VSH, ENCFF388BNI, ENCFF677BKK, ENCFF502TSY, ENCFF311FMI, ENCFF969BIE | ENCBS642YJZ | 1 | 1 | Mus musculus | unknown | 8-10 months | /replicates/1fb0b248-8ed1-43a6-bcc2-2c4787841ea0/ | ||||||||||||||||||||||
| ENCSR273DAC | ENCSR273DAC | single-nucleus ATAC-seq | snATAC-seq | Homo sapiens heart left ventricle tissue male adult (62 years) | heart left ventricle | Michael Snyder, Stanford | ENCODE | released | ENCFF503SER, ENCFF197TWS, ENCFF228FPD, ENCFF190HWL, ENCFF173WQI, ENCFF325VSM, ENCFF774PEG, ENCFF647DUT, ENCFF803XPH, ENCFF979FDI, ENCFF627ZSR | ENCBS315KVT | 1 | 1 | Homo sapiens | adult | 62 years | /replicates/c80337f5-9002-4d8b-abb6-02c898a91b59/ | 10X Genomics Chromium Controller | |||||||||||||||||||||
| ENCSR321AHR | ENCSR321AHR | single-nucleus ATAC-seq | snATAC-seq | Homo sapiens heart left ventricle tissue male adult (62 years) | heart left ventricle | Michael Snyder, Stanford | ENCODE | released | ENCFF541NMQ, ENCFF908ODJ, ENCFF896MCG, ENCFF404SOS, ENCFF949CNO, ENCFF181ZIS, ENCFF767DTT, ENCFF596SRG, ENCFF437NND, ENCFF833WCA, ENCFF920ZTM | ENCBS878QCW | 1 | 1 | Homo sapiens | adult | 62 years | /replicates/5f1fbfe8-fa56-4b68-8462-399ca96b7529/ | 10X Genomics Chromium Controller |