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Showing results 1 to 25 of 27196
| ID | Accession | Assay name | Assay title | Biosample classification | Target | Target of assay | Target gene symbol | Biosample summary | Biosample term name | Dbxrefs | Description | Lab | Project | Status | Files | Related series | Biosample accession | Biological replicate | Technical replicate | Linked antibody | Organism | Life stage | Biosample age | Biosample treatment | Biosample treatment ontology ID | Biosample treatment amount | Biosample treatment amount units | Biosample treatment duration | Biosample treatment duration units | Synchronization | Post-synchronization time | Post-synchronization time units | Biosample modification site target organism | Biosample modification site introduced gene organism | Replicates | Mixed biosamples | Cellular component | Library construction platform | Library construction method |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENCSR856UND | ENCSR856UND | DNase-seq | DNase-seq | primary cell | Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days | activated naive CD4-positive, alpha-beta T cell | John Stamatoyannopoulos, UW | ENCODE | released | ENCFF344YTS, ENCFF652RRU, ENCFF501IQL, ENCFF637PMR, ENCFF264SIL, ENCFF890HVE, ENCFF705BRN, ENCFF643MSF | ENCBS620HRS | 1 | 1 | Homo sapiens | adult | 43 years | Interleukin-2, anti-CD3 and anti-CD28 coated beads | UniProtKB:P60568 | 10 | ng/mL | 5, 7 | day | /replicates/dfc87643-ff55-4b34-951d-40e09beb5b88/ | ||||||||||||||||
| ENCSR469BXR | ENCSR469BXR | HiC | Hi-C | cell line | Homo sapiens HCT116 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | HCT116 | HCT116-cmv-OsTIR1-RAD21-mAC 3hr auxin treated 60min auxin withdrawal (auxin treatment and withdrawal time course) | Erez Aiden, Baylor | ENCODE | released | ENCFF392YMY, ENCFF989SSK, ENCFF173OJN, ENCFF412YFZ, ENCFF366GZI, ENCFF927HWU, ENCFF738ELB, ENCFF567TFE, ENCFF059GBE, ENCFF514COQ, ENCFF562MFS, ENCFF933LVV, ENCFF355UTD, ENCFF239ETG, ENCFF345DTE, ENCFF230VJE, ENCFF556TWZ, ENCFF056QCD, ENCFF973CLU, ENCFF700KOG, ENCFF816RRL, ENCFF903WWP, ENCFF653OKR, ENCFF038IUT, ENCFF093FRO, ENCFF925LNB, ENCFF981ZEX, ENCFF222HXW, ENCFF296HDD, ENCFF453RXU, ENCFF956VDP, ENCFF159YQA, ENCFF049OJF, ENCFF530VRO, ENCFF667WKF, ENCFF315KOW, ENCFF190PYT, ENCFF622GDB, ENCFF249MDI, ENCFF415DFQ, ENCFF812LEB, ENCFF762GUX, ENCFF594IFO, ENCFF586HXL, ENCFF249MJY, ENCFF841GPH, ENCFF975JQB, ENCFF213OGT, ENCFF799SKF, ENCFF484UMQ, ENCFF410WDD | ENCBS566ELG | 1 | 1, 2, 3 | Homo sapiens | adult | 48 years | 5-Phenyl-1H-indole-3-acetic acid | 1 | μM | 6 | hour | /replicates/1dcafb44-3c46-4250-a6bc-1d62c454ac45/, /replicates/30110520-b105-4415-8139-61450a32ea1b/, /replicates/0f653bcd-f2f0-4989-b694-6d50d8495319/ | ||||||||||||||||
| ENCSR723JEX | ENCSR723JEX | HiC | Hi-C | cell line | Homo sapiens HCT116 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | HCT116 | HCT116-cmv-OsTIR1-RAD21-mAC 3hr auxin treated 40min auxin withdrawal (auxin treatment and withdrawal time course) | Erez Aiden, Baylor | ENCODE | released | ENCFF507BVC, ENCFF718PCS, ENCFF497ZKD, ENCFF598QYD, ENCFF845GAG, ENCFF885IJT, ENCFF031OHH, ENCFF760IUD, ENCFF433RGO, ENCFF457PCB, ENCFF757WCB, ENCFF461CWD, ENCFF228TNN, ENCFF133NNN, ENCFF045PBZ, ENCFF836ENV, ENCFF624FLI, ENCFF392AZZ, ENCFF390DRX, ENCFF842TAC, ENCFF197OOP, ENCFF347RTQ, ENCFF598PSP, ENCFF312FGC, ENCFF839CDA, ENCFF727ABZ, ENCFF779ZFL, ENCFF361IPC, ENCFF057MOS, ENCFF586ZUT, ENCFF725TGL, ENCFF240IYN, ENCFF886DLC, ENCFF506DAO, ENCFF616BHM, ENCFF146UTI, ENCFF954EHD, ENCFF563MLW, ENCFF602ZRS, ENCFF330PRD, ENCFF493GKH, ENCFF218NVN, ENCFF405BHG, ENCFF411QBI, ENCFF177KFD, ENCFF574ESB, ENCFF111MSK, ENCFF860COX, ENCFF063XOY | ENCBS566ELG | 1 | 1, 2, 3 | Homo sapiens | adult | 48 years | 5-Phenyl-1H-indole-3-acetic acid | 1 | μM | 6 | hour | /replicates/2a6725d4-faeb-4eac-bfd7-c942c5bd419a/, /replicates/fdcd6735-1c46-48a1-97b6-476f588ddde1/, /replicates/3914917d-4fa2-48ab-917f-b285ea4a06a6/ | ||||||||||||||||
| ENCSR447BVZ | ENCSR447BVZ | HiC | Hi-C | cell line | Homo sapiens HCT116 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | HCT116 | HCT116-cmv-OsTIR1-RAD21-mAC 3hr auxin treated 20min auxin withdrawal (auxin treatment and withdrawal time course) | Erez Aiden, Baylor | ENCODE | released | ENCFF227HKY, ENCFF070BHG, ENCFF447NRZ, ENCFF346YPV, ENCFF363DII, ENCFF194KCV, ENCFF685TQC, ENCFF022MDS, ENCFF134WTH, ENCFF339VNE, ENCFF333VGE, ENCFF217XRC, ENCFF812KOK, ENCFF338ZSZ, ENCFF708GTR, ENCFF355SVQ, ENCFF283RWS, ENCFF837HOZ, ENCFF077LSC, ENCFF042HDZ, ENCFF152ARL, ENCFF818QSK, ENCFF760WZW, ENCFF820ENY, ENCFF887QBN, ENCFF294FSB, ENCFF970ZAF, ENCFF794ZKD, ENCFF814HOT, ENCFF111HNG, ENCFF154HOJ, ENCFF684FEL, ENCFF836ENB, ENCFF290YXD, ENCFF105SMV, ENCFF824HTM, ENCFF071LPJ, ENCFF455USK, ENCFF087WTX, ENCFF082NMZ, ENCFF133FUJ, ENCFF072AVN, ENCFF815RJS, ENCFF175TGQ, ENCFF498PCO, ENCFF297NTW, ENCFF296FVO, ENCFF862PZU, ENCFF874ARU, ENCFF164NDL, ENCFF366DUD | ENCBS566ELG | 1 | 1, 2, 3 | Homo sapiens | adult | 48 years | 5-Phenyl-1H-indole-3-acetic acid | 1 | μM | 6 | hour | /replicates/f7d4c985-af5b-45a3-b27a-2bf10f9d9fc4/, /replicates/1a708fdb-5966-482e-90ee-7d10bda1732a/, /replicates/9c4227b7-98c1-41d9-856d-577f567183a5/ | ||||||||||||||||
| ENCSR173DMV | ENCSR173DMV | HiC | Hi-C | cell line | Homo sapiens HCT116 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | HCT116 | HCT116-cmv-OsTIR1-RAD21-mAC 3hr auxin treated (auxin treatment and withdrawal time course) | Erez Aiden, Baylor | ENCODE | released | ENCFF518SUB, ENCFF505MSB, ENCFF739WKF, ENCFF450VLS, ENCFF502WHK, ENCFF018BGG, ENCFF558UII, ENCFF436USC, ENCFF136GHF, ENCFF396ZOI, ENCFF394IAQ, ENCFF995XRN, ENCFF659NAH, ENCFF273HUE, ENCFF154IMX, ENCFF327XXG, ENCFF483VQT, ENCFF062XTE, ENCFF228STM, ENCFF674KQQ, ENCFF415CNB, ENCFF219OOP, ENCFF791ZVG, ENCFF567ERF, ENCFF090UVL, ENCFF813ZYM, ENCFF437XNV, ENCFF947BHO, ENCFF323WVA, ENCFF752JLN, ENCFF286UYU, ENCFF911UDJ, ENCFF309TAV, ENCFF769BGW, ENCFF443ALY, ENCFF026VAW, ENCFF507UPF, ENCFF742MHX, ENCFF095JCF | ENCBS566ELG | 1 | 1, 2, 3 | Homo sapiens | adult | 48 years | 5-Phenyl-1H-indole-3-acetic acid | 1 | μM | 6 | hour | /replicates/e9a4ab00-c393-47fe-9327-e976e33859a5/, /replicates/461bc724-f3b6-4d23-9e90-29f9d7d8eb0d/, /replicates/f3870485-e649-4f86-8de0-85718ffdce4e/ | ||||||||||||||||
| ENCSR054ZMK | ENCSR054ZMK | ChIP-seq | TF ChIP-seq | cell line | /targets/NR2F2-human/ | NR2F2 | NR2F2 | Homo sapiens HepG2 expressing RNAi targeting H. sapiens FOXA3 | HepG2 | NR2F2 ChIP-seq on HepG2 cells treated with shRNA targeting FOXA3 | Michael Snyder, Stanford | ENCODE | released | ENCFF032VKB, ENCFF996ZFG | ENCBS825SFH | 1 | 1 | ENCAB000AJH | Homo sapiens | child | 15 years | /organisms/human/ | /replicates/0f6ec97e-16ea-45f1-b1f4-d9c2b506e075/ | ||||||||||||||||
| ENCSR441NSM | ENCSR441NSM | ChIP-seq | Control ChIP-seq | cell line | /targets/NR2F2-human/ | NR2F2 | NR2F2 | Homo sapiens HepG2 | HepG2 | NR2F2 ChIP-seq on HepG2 cells treated with vector control shRNA | Michael Snyder, Stanford | ENCODE | released | ENCFF554OXP, ENCFF668JRZ, ENCFF598VCM, ENCFF504SIQ | ENCBS348HRE, ENCBS238BKJ | 1, 2 | 1 | ENCAB000AJH | Homo sapiens | child | 15 years | /replicates/4b49c633-4743-48a1-9c89-ae7008c14802/, /replicates/5303823e-2af1-4246-af9b-7ebfd2756eee/ | |||||||||||||||||
| ENCSR150XQV | ENCSR150XQV | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM20787 | GM20787 | GM20787 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF877FHO, ENCFF422OJH, ENCFF187KTQ, ENCFF403NKY | ENCBS799IZP, ENCBS748UWQ | 1, 2 | 1 | Homo sapiens | unknown | /replicates/68d5c45e-db63-4db8-8e8c-2f3b81402972/, /replicates/4aa8906a-4228-4d2b-972c-c1085140eeba/ | ||||||||||||||||||||||
| ENCSR835TRJ | ENCSR835TRJ | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM20530 | GM20530 | GM20530 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF748QCX, ENCFF296LWX, ENCFF938WOP, ENCFF716JZR | ENCBS214MIL, ENCBS230MIW | 2, 1 | 1 | Homo sapiens | unknown | /replicates/7eae4f3e-90b7-49a4-b3d6-101f68fab4cb/, /replicates/d58a6202-cfe0-4d13-ae0e-e740c6c86fcf/ | ||||||||||||||||||||||
| ENCSR558XAR | ENCSR558XAR | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19257 | GM19257 | GM19257 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF622KOE, ENCFF553TIK, ENCFF624XCP, ENCFF887VLB | ENCBS435ZXU, ENCBS130TTK | 2, 1 | 1 | Homo sapiens | unknown | /replicates/228ce267-5fc4-4df4-b7d5-c6f38e7e966a/, /replicates/b2a78bdf-59c2-477b-8a06-eb98960095d3/ | ||||||||||||||||||||||
| ENCSR350PLV | ENCSR350PLV | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19239 | GM19239 | GM19239 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF502LST, ENCFF612LOQ, ENCFF937FSP, ENCFF851YLJ | ENCBS673IHT, ENCBS328PJT | 1, 2 | 1 | Homo sapiens | unknown | /replicates/aa75747f-3bf8-4667-9270-0c2afa141c8e/, /replicates/c6f96858-ecc5-4625-b869-79a55ae60023/ | ||||||||||||||||||||||
| ENCSR955MJB | ENCSR955MJB | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19238 | GM19238 | GM19238 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF464FQV, ENCFF151NLW, ENCFF743GSS, ENCFF548BKI | ENCBS948GPA, ENCBS510BCA | 1, 2 | 1 | Homo sapiens | unknown | /replicates/71e46fcf-3c34-4d94-9b63-8d7807738707/, /replicates/422c92f4-521e-4af5-b586-d48e23a3cb49/ | ||||||||||||||||||||||
| ENCSR817BUE | ENCSR817BUE | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19225 | GM19225 | GM19225 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF026LHZ, ENCFF973AZV, ENCFF257YHA, ENCFF088JIJ | ENCBS554JMW, ENCBS275HID | 1, 2 | 1 | Homo sapiens | unknown | /replicates/e0283e52-aa3b-422a-b05f-3e6c96961756/, /replicates/d0f85b70-1eb2-4b2b-8bcb-71ca4a0f6f7c/ | ||||||||||||||||||||||
| ENCSR517FYU | ENCSR517FYU | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19204 | GM19204 | GM19204 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF546AYG, ENCFF856MWB, ENCFF288ZLU, ENCFF844HIN | ENCBS458ROW, ENCBS116IXP | 2, 1 | 1 | Homo sapiens | unknown | /replicates/b0d8da9c-f772-4895-b0e9-dd3e8145d04c/, /replicates/9ff95859-5f19-464b-9f62-697f5eebefe2/ | ||||||||||||||||||||||
| ENCSR946IFS | ENCSR946IFS | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19147 | GM19147 | GM19147 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF896UHE, ENCFF866VLK, ENCFF854SWY, ENCFF449RMK | ENCBS609ZTM, ENCBS006ETI | 2, 1 | 1 | Homo sapiens | unknown | /replicates/50f1e47d-4a9d-4657-85ff-a777aaa7fd5d/, /replicates/edf3f4fa-b17e-4d5d-a464-f0c3dfe7d0ec/ | ||||||||||||||||||||||
| ENCSR882MBJ | ENCSR882MBJ | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19141 | GM19141 | GM19141 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF652KCE, ENCFF020BSW, ENCFF180SZN, ENCFF008VQG | ENCBS994KAE, ENCBS133DEO | 1, 2 | 1 | Homo sapiens | unknown | /replicates/d34eb7bf-294b-4f83-b777-c3b6e019fc35/, /replicates/79966db9-03a9-47cf-a61f-aa65094d9e76/ | ||||||||||||||||||||||
| ENCSR682NEW | ENCSR682NEW | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19138 | GM19138 | GM19138 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF405GDV, ENCFF065CGK, ENCFF779XTS, ENCFF734JOV | ENCBS146YQO, ENCBS047VCM | 1, 2 | 1 | Homo sapiens | unknown | /replicates/390d2ae3-6cd9-4d5c-96cf-3f8e750ad15d/, /replicates/7c40c5f4-df0d-4bb8-97e5-6e0466df1351/ | ||||||||||||||||||||||
| ENCSR459TWG | ENCSR459TWG | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM19114 | GM19114 | GM19114 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF497UFA, ENCFF638MFS, ENCFF720SEU, ENCFF744NZR | ENCBS555KGN, ENCBS530MDM | 2, 1 | 1 | Homo sapiens | unknown | /replicates/50178d1a-6c12-4652-87b6-dc67f5625854/, /replicates/134856e0-2aef-4c7e-95a7-ba245e4e0f12/ | ||||||||||||||||||||||
| ENCSR571CLM | ENCSR571CLM | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM18907 | GM18907 | GM18907 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF890AIQ, ENCFF197RWM, ENCFF128NLR, ENCFF705HDS | ENCBS189XPN, ENCBS451OIY | 1, 2 | 1 | Homo sapiens | unknown | /replicates/e7fd1e87-9ae8-4a1c-8cea-8a53089292a6/, /replicates/1e11e01c-c6c3-478d-852a-533da32c6b72/ | ||||||||||||||||||||||
| ENCSR581EYM | ENCSR581EYM | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM18861 | GM18861 | GM18861 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF456CGE, ENCFF754LTS, ENCFF211ZBT, ENCFF311HEH | ENCBS584DVA, ENCBS876AFA | 1, 2 | 1 | Homo sapiens | adult | /replicates/483e2d65-5393-4ab8-b9a7-754646a7466b/, /replicates/9f2a36af-ab0a-479f-af31-ff194e34ac58/ | ||||||||||||||||||||||
| ENCSR775XLU | ENCSR775XLU | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM18510 | GM18510 | GM18510 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF410VNL, ENCFF814UDY, ENCFF691YEY, ENCFF696WFL | ENCBS529RSZ, ENCBS189LNZ | 2, 1 | 1 | Homo sapiens | unknown | /replicates/679a0045-5fee-4dee-863a-5daef0a8ece5/, /replicates/5602b440-8caf-4c19-9893-5aa529d94ab6/ | ||||||||||||||||||||||
| ENCSR843URE | ENCSR843URE | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM18508 | GM18508 | GM18508 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF230IQH, ENCFF018ZJM, ENCFF007WRB, ENCFF367DKX | ENCBS324OEB, ENCBS531UWN | 1, 2 | 1 | Homo sapiens | adult | /replicates/9bd482b3-5829-4b95-8cd0-37747a579341/, /replicates/8d42e41e-1d5c-4d48-88f7-6822127ac838/ | ||||||||||||||||||||||
| ENCSR006SBQ | ENCSR006SBQ | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM18505 | GM18505 | GM18505 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF800QRF, ENCFF681RTW, ENCFF591RKU, ENCFF587KYC | ENCBS345FNK, ENCBS189DGI | 2, 1 | 1 | Homo sapiens | unknown | /replicates/a47d26c0-cffa-401f-afb0-a11d475163d8/, /replicates/733220a2-1d64-4c8b-bd54-15b22972eec4/ | ||||||||||||||||||||||
| ENCSR398UQG | ENCSR398UQG | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM18498 | GM18498 | GM18498 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF514NEU, ENCFF295GLQ, ENCFF154SKH, ENCFF632HZH | ENCBS506CII, ENCBS332MGA | 1, 2 | 1 | Homo sapiens | adult | /replicates/2bf80fab-6b11-40f8-8a7e-db775a2d636a/, /replicates/ccbc8604-35c6-427b-9060-ed39416bf79c/ | ||||||||||||||||||||||
| ENCSR849TZZ | ENCSR849TZZ | polyA plus RNA-seq | polyA plus RNA-seq | cell line | Homo sapiens GM18486 | GM18486 | GM18486 RNA Seq | Erez Aiden, Baylor | ENCODE | released | ENCFF341WWI, ENCFF373EFF, ENCFF837JEB, ENCFF728NKY | ENCBS576WWP, ENCBS787GVN | 2, 1 | 1 | Homo sapiens | adult | /replicates/2bfb8147-74d1-49cf-9a61-5ea9d19d2982/, /replicates/d684801a-8afc-42c0-b296-18a242706ad2/ |