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Showing results 1 to 25 of 25117
IDAccessionAssay nameAssay titleBiosample classificationTargetTarget of assayTarget gene symbolBiosample summaryBiosample term nameDbxrefs
Description
LabProjectStatusFilesRelated seriesBiosample accessionBiological replicateTechnical replicateLinked antibodyOrganismLife stageBiosample ageBiosample treatmentBiosample treatment ontology IDBiosample treatment amountBiosample treatment amount unitsBiosample treatment durationBiosample treatment duration unitsSynchronizationPost-synchronization timePost-synchronization time unitsBiosample modification site target organismBiosample modification site introduced gene organismReplicatesMixed biosamplesCellular componentLibrary construction platformLibrary construction method
ENCSR398OAOENCSR398OAOseqFISHseqFISHtissueHomo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)dorsolateral prefrontal cortexBarbara Wold, CaltechENCODEreleasedENCFF852RMT, ENCFF381DOD, ENCFF286PNZENCBS422TMB11Homo sapiensadult90 or above years/replicates/a53697fb-fd8a-4bd7-8781-2e8229284d63/
ENCSR309QSVENCSR309QSVseqFISHseqFISHtissueHomo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)dorsolateral prefrontal cortexBarbara Wold, CaltechENCODEreleasedENCFF619GCD, ENCFF345NPX, ENCFF845CUGENCBS904CGT11Homo sapiensadult90 or above years/replicates/a9d7a890-e521-4c51-8287-8f0ba0fe7620/
ENCSR051YOPENCSR051YOPseqFISHseqFISHtissueHomo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)dorsolateral prefrontal cortexBarbara Wold, CaltechENCODEreleasedENCFF662GQT, ENCFF697TRE, ENCFF489ZNKENCBS660AUE11Homo sapiensadult90 or above years/replicates/79f7010d-56b9-4935-815f-3fd64096a40c/
ENCSR970EPLENCSR970EPLseqFISHseqFISHtissueHomo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)dorsolateral prefrontal cortexBarbara Wold, CaltechENCODEreleasedENCFF682UIQ, ENCFF608CVW, ENCFF161MPNENCBS411JUI11Homo sapiensadult79 years/replicates/4534e7fe-7f6e-4764-9cdd-87c28dbed5b9/
ENCSR876VXRENCSR876VXRseqFISHseqFISHtissueHomo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)dorsolateral prefrontal cortexBarbara Wold, CaltechENCODEreleasedENCFF451MKW, ENCFF880DOR, ENCFF698MRPENCBS436WHA11Homo sapiensadult90 or above years/replicates/a83178a1-19ba-47b8-9c36-4707c895d6db/
ENCSR167IUGENCSR167IUGRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J neutrophil male adult (83.00 days)neutrophilMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.neutrophil_spleen_M_83daysBarbara Wold, CaltechENCODEreleasedENCFF234LUQ, ENCFF257PGF, ENCFF753MPF, ENCFF463ESG, ENCFF336LXE, ENCFF768IVG, ENCFF535PCQ, ENCFF469SBQ, ENCFF557UPN, ENCFF905MMLENCBS517LJD11Mus musculusadult83.00 days/replicates/bc2ad6aa-5943-4ea4-a93e-503befd01ad6/
ENCSR698PISENCSR698PISRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J neutrophil male adult (65.00 days)neutrophilMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.neutrophil_spleen_M_65daysBarbara Wold, CaltechENCODEreleasedENCFF970VKB, ENCFF345BBC, ENCFF689OBF, ENCFF580PCR, ENCFF982SAU, ENCFF902DYV, ENCFF173ZYG, ENCFF554ZGN, ENCFF738PGX, ENCFF848BMK, ENCFF487THM, ENCFF523JAG, ENCFF652LKA, ENCFF788LUR, ENCFF063FGF, ENCFF966TPM, ENCFF227VPG, ENCFF662IAL, ENCFF095KYP, ENCFF199EEZENCBS597TMV, ENCBS646YRX1, 21Mus musculusadult65.00 days/replicates/ea936a65-0a00-4e86-97e9-814fcad00ab6/, /replicates/5ef622a7-a1fa-423e-916d-f80d56fac16c/
ENCSR251XVYENCSR251XVYRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J neutrophil male adult (59.00 days)neutrophilMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.neutrophil_spleen_M_59daysBarbara Wold, CaltechENCODEreleasedENCFF023MKT, ENCFF195JLT, ENCFF649PPR, ENCFF908GHJ, ENCFF725ZGY, ENCFF649HPO, ENCFF258UHQ, ENCFF101LSA, ENCFF934DBK, ENCFF516TRW, ENCFF733GMT, ENCFF478FWO, ENCFF635SQV, ENCFF244KGW, ENCFF948BPG, ENCFF576RZY, ENCFF415EYQ, ENCFF257NZE, ENCFF020QVL, ENCFF213RBFENCBS159CLP, ENCBS236AZT1, 21Mus musculusadult59.00 days/replicates/af49c227-6e64-41ea-88d9-271f775f3519/, /replicates/92c6a624-e463-4911-aef1-de81afe5b183/
ENCSR309GVQENCSR309GVQRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J neutrophil female adult (83.00 days)neutrophilMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.neutrophil_spleen_F_83daysBarbara Wold, CaltechENCODEreleasedENCFF455DHP, ENCFF094OIX, ENCFF081UYH, ENCFF282JWF, ENCFF442EHE, ENCFF297IGO, ENCFF408JVU, ENCFF508YMM, ENCFF687JGA, ENCFF948ZHZENCBS430REP11Mus musculusadult83.00 days/replicates/028eb61d-9425-4ca8-8276-f852ed3faa7e/
ENCSR293FROENCSR293FRORNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J neutrophil female adult (59.00 days)neutrophilMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.neutrophil_spleen_F_59daysBarbara Wold, CaltechENCODEreleasedENCFF609ZVL, ENCFF287ILD, ENCFF664TQP, ENCFF785PST, ENCFF669VMP, ENCFF249SGG, ENCFF355ODE, ENCFF902YYM, ENCFF243UNP, ENCFF465CKRENCBS928RPJ11Mus musculusadult59.00 days/replicates/5396194d-59c1-4f2b-b121-af3f46e9d133/
ENCSR959ZHOENCSR959ZHORNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J monocyte male adult (59.00 days)monocyteMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.monocytes_spleen_M_59daysBarbara Wold, CaltechENCODEreleasedENCFF477YHR, ENCFF369DQD, ENCFF838SNG, ENCFF423UTO, ENCFF758ZJC, ENCFF147QAN, ENCFF975NUR, ENCFF803NXP, ENCFF105CRZ, ENCFF689AHUENCBS277BDX11Mus musculusadult59.00 days/replicates/9e2f8907-9559-453a-9e56-3281c6effb62/
ENCSR536HHAENCSR536HHARNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J monocyte female adult (59.00 days)monocyteMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.monocytes_spleen_F_59daysBarbara Wold, CaltechENCODEreleasedENCFF178HDG, ENCFF558SCU, ENCFF072NNY, ENCFF185FNL, ENCFF883QNP, ENCFF924HOW, ENCFF621EBU, ENCFF323TQB, ENCFF673HYR, ENCFF181NDAENCBS606RYO11Mus musculusadult59.00 days/replicates/b3c9612b-609b-424a-99af-3a6d8f74c7d6/
ENCSR769LJYENCSR769LJYRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J CD8-positive naive resting alpha-beta T cell male adult (57.00 days)CD8-positive naive resting alpha-beta T cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD8 naive_spleen_M_57daysBarbara Wold, CaltechENCODEreleasedENCFF017LOD, ENCFF622RNX, ENCFF017UBA, ENCFF244NEF, ENCFF507CDW, ENCFF850FJH, ENCFF024CTT, ENCFF920OKC, ENCFF147FKY, ENCFF084YSEENCBS099LIC11Mus musculusadult57.00 days/replicates/d532618d-95a2-4c5e-8402-63f4b4fc20a2/
ENCSR835KFTENCSR835KFTRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J CD4-positive naive resting alpha-beta T cell male adult (76.00 days)CD4-positive naive resting alpha-beta T cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD4 naive_spleen_M_76daysBarbara Wold, CaltechENCODEreleasedENCFF933KQV, ENCFF475NNM, ENCFF830UEE, ENCFF893EKS, ENCFF515ZQI, ENCFF025JLJ, ENCFF206IFB, ENCFF022MSS, ENCFF030BWE, ENCFF610MSAENCBS997RQF11Mus musculusadult76.00 days/replicates/b5c167e6-8bb4-46bc-937d-b3ff9f15aa1c/
ENCSR968ZOAENCSR968ZOARNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J CD4-positive naive resting alpha-beta T cell female adult (57.00 days)CD4-positive naive resting alpha-beta T cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD4 naive_spleen_F_57daysBarbara Wold, CaltechENCODEreleasedENCFF671TUD, ENCFF179EFV, ENCFF722BCQ, ENCFF479SUH, ENCFF403PCU, ENCFF305GMR, ENCFF956JTD, ENCFF541MYY, ENCFF283MAT, ENCFF923COBENCBS958MXN11Mus musculusadult57.00 days/replicates/b4a65b1e-844d-4059-91a3-48bdccaa17ed/
ENCSR377UPTENCSR377UPTRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J T-cell male adult (66.00 days)T-cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD3_spleen_M_66daysBarbara Wold, CaltechENCODEreleasedENCFF014SLC, ENCFF582WGH, ENCFF494ZWE, ENCFF904RJF, ENCFF270EMG, ENCFF653TJG, ENCFF548DLB, ENCFF124FWX, ENCFF301NXU, ENCFF051WIU, ENCFF274GGB, ENCFF684OGU, ENCFF403HNY, ENCFF370EQV, ENCFF845UZL, ENCFF933VFK, ENCFF894JPW, ENCFF689QCO, ENCFF798FHD, ENCFF842ZYB, ENCFF006PES, ENCFF150ODG, ENCFF352MZX, ENCFF974EED, ENCFF643APU, ENCFF494ISW, ENCFF514SIH, ENCFF687FXV, ENCFF654WDB, ENCFF942RGB, ENCFF644LFI, ENCFF013CQT, ENCFF411VRP, ENCFF150PAB, ENCFF599LAP, ENCFF459GDD, ENCFF265YDB, ENCFF606IQE, ENCFF075HIN, ENCFF152ZQBENCBS380IYP, ENCBS742VKS, ENCBS460IRW, ENCBS598TMX2, 3, 4, 11Mus musculusadult66.00 days/replicates/a3f47a92-8720-4b3f-89f6-ac1284fb480a/, /replicates/793c178f-4931-4c54-ab38-e0d128eb736a/, /replicates/83d0fea2-8050-41ff-8d22-b51b55c1bbe1/, /replicates/6f957719-b0c8-4d0a-819e-58b48ce69ac7/
ENCSR034MGFENCSR034MGFRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J T-cell female adult (66.00 days)T-cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD3_spleen_F_66daysBarbara Wold, CaltechENCODEreleasedENCFF532UKS, ENCFF013HYW, ENCFF274ESJ, ENCFF466LHS, ENCFF730GHF, ENCFF473EON, ENCFF355DVV, ENCFF411SAN, ENCFF446VLE, ENCFF009LXL, ENCFF493IKG, ENCFF715ILX, ENCFF405ZFR, ENCFF788EZC, ENCFF694PSQ, ENCFF387ECO, ENCFF614XGP, ENCFF576ZPO, ENCFF212AAW, ENCFF462WJQ, ENCFF186TQP, ENCFF343ZWP, ENCFF926XJR, ENCFF033RXH, ENCFF042FOJ, ENCFF268JPQ, ENCFF294QFY, ENCFF768CXY, ENCFF926LRG, ENCFF143CEMENCBS899UQX, ENCBS462YUX, ENCBS359DHS2, 3, 11Mus musculusadult66.00 days/replicates/279fd752-5efa-493a-b94a-7f2a8b5b3b35/, /replicates/488adc55-03bd-47d0-beb3-0857e9edb2c2/, /replicates/cf6494a2-48dd-458f-8477-80a4f5c6db25/
ENCSR092BBWENCSR092BBWRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J B cell male adult (67.00 days)B cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD19_spleen_M_67daysBarbara Wold, CaltechENCODEreleasedENCFF248ELC, ENCFF260KJY, ENCFF720MPJ, ENCFF349AIG, ENCFF049ODQ, ENCFF759OUU, ENCFF853EZA, ENCFF172MYY, ENCFF597QOP, ENCFF665WZN, ENCFF471BGD, ENCFF862RYY, ENCFF737HDB, ENCFF089CGA, ENCFF837CBK, ENCFF293EJN, ENCFF151YNW, ENCFF437VMW, ENCFF740JGA, ENCFF011BJL, ENCFF377TDM, ENCFF040PWV, ENCFF729BUS, ENCFF521PUI, ENCFF779NUH, ENCFF084TIL, ENCFF564EAR, ENCFF744KUZ, ENCFF244LDA, ENCFF299YFX, ENCFF823MON, ENCFF788PJK, ENCFF363COW, ENCFF879LVB, ENCFF581GKU, ENCFF029FYN, ENCFF031ACD, ENCFF210KSN, ENCFF188ULR, ENCFF642TUCENCBS821FUE, ENCBS489PFJ, ENCBS718WEQ, ENCBS496IKI1, 2, 3, 41Mus musculusadult67.00 days/replicates/11cc39ca-2c64-4f6f-92f2-8ed9216a0198/, /replicates/9f3a89cf-f487-47b3-a85f-4bdd0677a3cd/, /replicates/8d81714d-118f-4667-9c45-fe7db7cf2fdc/, /replicates/b5dfa3f4-3daf-4429-91ab-fc9e066be2d7/
ENCSR243UCHENCSR243UCHRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J B cell male adult (62.00 days)B cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD19_spleen_M_62daysBarbara Wold, CaltechENCODEreleasedENCFF712DGP, ENCFF935LAF, ENCFF359GCY, ENCFF945ICZ, ENCFF985GIZ, ENCFF191HQJ, ENCFF775WPF, ENCFF079KUC, ENCFF073JJY, ENCFF870AJF, ENCFF050SZH, ENCFF621AJD, ENCFF382JEL, ENCFF712QUT, ENCFF856SLG, ENCFF334BSJ, ENCFF935FNY, ENCFF101DWM, ENCFF985DVO, ENCFF885CXA, ENCFF071FNQ, ENCFF646ZRQ, ENCFF317LSX, ENCFF519KPD, ENCFF722NIC, ENCFF046ASX, ENCFF904UCI, ENCFF569UJC, ENCFF784VIL, ENCFF853BWA, ENCFF593VOJ, ENCFF540SUL, ENCFF658AUN, ENCFF414SUC, ENCFF090KFZ, ENCFF704RKB, ENCFF489XJB, ENCFF218CKQ, ENCFF407DKQ, ENCFF008JPKENCBS278JYA, ENCBS493EYM, ENCBS012ASP, ENCBS871ZJQ1, 2, 3, 41Mus musculusadult62.00 days/replicates/1b269338-61f0-4f6b-a1c7-83f608c298f1/, /replicates/00ce4b06-fce4-40af-b05c-3c623b22940b/, /replicates/f9f18934-d2b5-4390-9e62-a551ba9581c5/, /replicates/1be869b7-0a88-4b4d-831c-bd07fc31f950/
ENCSR788PEEENCSR788PEERNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J B cell female adult (67.00 days)B cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD19_spleen_F_67daysBarbara Wold, CaltechENCODEreleasedENCFF574YMK, ENCFF442OKF, ENCFF062GNP, ENCFF653QJY, ENCFF428RAE, ENCFF317PPF, ENCFF364SKR, ENCFF010EZE, ENCFF120XGZ, ENCFF261VLM, ENCFF046XUG, ENCFF796YEL, ENCFF960CFD, ENCFF142PJA, ENCFF515FAC, ENCFF171RUY, ENCFF263BJV, ENCFF909LEK, ENCFF250CXR, ENCFF395ZAW, ENCFF584IEC, ENCFF496KQS, ENCFF234WKG, ENCFF549NRZ, ENCFF783XMP, ENCFF052GLX, ENCFF389UCV, ENCFF829VGP, ENCFF251CML, ENCFF453DIX, ENCFF034MAU, ENCFF084XIP, ENCFF193NNE, ENCFF015NML, ENCFF500RQQ, ENCFF445NCW, ENCFF486YSY, ENCFF160IHH, ENCFF014JUI, ENCFF255HUKENCBS982OLT, ENCBS904RDT, ENCBS661EAT, ENCBS575JXK1, 2, 3, 41Mus musculusadult67.00 days/replicates/f948533f-b4f2-458d-b8f9-4c0ec5df134a/, /replicates/4a0b7488-f97d-478c-a9e6-9383504ee3ea/, /replicates/50ddf6dc-02ee-479d-b019-3b09318f5c2f/, /replicates/fba07a01-c155-4dc8-adce-a10d6112e1c1/
ENCSR703ACFENCSR703ACFRNA-seqtotal RNA-seqprimary cellMus musculus strain B6CASTF1/J B cell female adult (55.00 days) and female adult (62.00 days)B cellMouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD19_spleen_F_62daysBarbara Wold, CaltechENCODEreleasedENCFF186VNL, ENCFF499GDC, ENCFF302TQH, ENCFF854IBU, ENCFF705IHP, ENCFF020LYA, ENCFF592JQC, ENCFF843VEB, ENCFF353XSP, ENCFF370WEH, ENCFF235IEH, ENCFF395VSK, ENCFF379QOL, ENCFF724SFA, ENCFF469EVO, ENCFF571BHD, ENCFF963VOL, ENCFF901TBT, ENCFF408JZK, ENCFF694LBO, ENCFF145YSE, ENCFF627IVZ, ENCFF264OZT, ENCFF490CYU, ENCFF373VWI, ENCFF336RIU, ENCFF366QBQ, ENCFF015BGV, ENCFF292AZT, ENCFF470ADR, ENCFF050AGP, ENCFF345WZS, ENCFF849PCF, ENCFF236BVJ, ENCFF337GDA, ENCFF205DIO, ENCFF217RWQ, ENCFF970SYT, ENCFF331FSX, ENCFF705ESXENCBS032CJY, ENCBS652PQK, ENCBS397NDI, ENCBS285KOP1, 2, 3, 41Mus musculusadult62.00 days, 55.00 days/replicates/1f776102-a505-4645-8778-020cbff55060/, /replicates/26a5ec47-f38e-4d1a-b7fd-144220406a53/, /replicates/4b61c269-76dd-4345-8d34-aa18dd0ea3d6/, /replicates/25fa1799-af4a-40a2-9898-d2f204f3586d/
ENCSR594BJFENCSR594BJFsingle-nucleus ATAC-seqsnATAC-seqtissueHomo sapiens liver tissue nuclear fraction female adult (33 years)liverMichael Snyder, StanfordENCODEreleasedENCFF866YHQ, ENCFF884USK, ENCFF153UUO, ENCFF719GZO, ENCFF535UHX, ENCFF936OOH, ENCFF837CJR, ENCFF769WGS, ENCFF017OEP, ENCFF296PDW, ENCFF502VAP, ENCFF640TRJ, ENCFF679GFC, ENCFF478ULUENCBS748WBD11Homo sapiensadult33 years/replicates/eb6ddc9d-cec1-475d-8e8c-e1da54f032c2/nucleus10X Genomics Chromium Controller
ENCSR659ANGENCSR659ANGsingle-nucleus ATAC-seqsnATAC-seqtissueHomo sapiens liver tissue nuclear fraction male adult (31 years)liverMichael Snyder, StanfordENCODEreleasedENCFF551VJV, ENCFF742DYQ, ENCFF584NVU, ENCFF503RSW, ENCFF769VAZ, ENCFF328HWB, ENCFF021YEI, ENCFF568DTR, ENCFF686UDM, ENCFF144BTR, ENCFF634WSV, ENCFF349YOZ, ENCFF674BWR, ENCFF375OTAENCBS856BWW11Homo sapiensadult31 years/replicates/a8978db3-fe1b-42f1-9ea0-2e42b73d1e09/nucleus10X Genomics Chromium Controller
ENCSR074DORENCSR074DORsingle-nucleus ATAC-seqsnATAC-seqtissueHomo sapiens liver tissue nuclear fraction female adult (39 years)liverMichael Snyder, StanfordENCODEreleasedENCFF665CUM, ENCFF657GDU, ENCFF055GDP, ENCFF451MFE, ENCFF777ORW, ENCFF969GSH, ENCFF414GGW, ENCFF290TFC, ENCFF714FWE, ENCFF859SMH, ENCFF289MPA, ENCFF304VQW, ENCFF067KIG, ENCFF589YDEENCBS509PYF11Homo sapiensadult39 years/replicates/d07f604d-75ed-4880-9aef-6551a0210cb6/nucleus10X Genomics Chromium Controller
ENCSR497ZSTENCSR497ZSTsingle-nucleus ATAC-seqsnATAC-seqtissueHomo sapiens liver tissue nuclear fraction male adult (35 years)liverMichael Snyder, StanfordENCODEreleasedENCFF665VZY, ENCFF538JIR, ENCFF412RGG, ENCFF545JMM, ENCFF818WKU, ENCFF464JDL, ENCFF723SAE, ENCFF721FRD, ENCFF087RXJ, ENCFF003ENX, ENCFF202CSU, ENCFF599JUF, ENCFF254ZIC, ENCFF744GTEENCBS538HCO11Homo sapiensadult35 years/replicates/0a9124f3-3ed7-4a65-83ad-df81d329786f/nucleus10X Genomics Chromium Controller