Summary for ENCSR926DHA
doi:10.17989/ENCSR926DHA
Summary
- Status
- released
- Description
- REMC Epigenome (Class 3) for Fetal Brain Male using donors/samples:H-22510;UW_H22676
- Donor diversity
- composite
- Assay
- MeDIP-seq, DNase-seq, transcription profiling by array assay, RRBS, ChIP-seq, MRE-seq
- Target
- H3K27me3, H3K4me1, H3K36me3, Methylcytidine, H3K9me3, H3K4me3
- Biosample summary
- brain tissue
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E081
- External resources
Experiments in ENCSR926DHA
Experiments
11 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|---|
ENCSR446IQC | transcription profiling by array assay | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | John Stamatoyannopoulos, UW | archived | ||
ENCSR698YCY | RRBS | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | Bradley Bernstein, Broad | archived | ||
ENCSR570GUP | MRE-seq | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | Joseph Costello, UCSF | archived | ||
ENCSR231TOY | MeDIP-seq | Methylcytidine | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | Joseph Costello, UCSF | archived | |
ENCSR479BPF | ChIP-seq | H3K27me3 | ENCDO670CKN | Homo sapiens brain tissue female embryo (120 days) | Bradley Bernstein, Broad | released | |
ENCSR018OGF | ChIP-seq | H3K9me3 | ENCDO670CKN | Homo sapiens brain tissue female embryo (120 days) | Bradley Bernstein, Broad | released | |
ENCSR143MZL | ChIP-seq | H3K4me3 | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | Bradley Bernstein, Broad | released | |
ENCSR627STE | ChIP-seq | H3K27me3 | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | Bradley Bernstein, Broad | released | |
ENCSR829NJE | ChIP-seq | H3K9me3 | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | Bradley Bernstein, Broad | released | |
ENCSR888JWS | ChIP-seq | H3K36me3 | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | Bradley Bernstein, Broad | released | |
ENCSR649KBB | DNase-seq | ENCDO762SKK | Homo sapiens brain tissue male embryo (122 days) | John Stamatoyannopoulos, UW | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR603VTC | input library | Homo sapiens brain tissue female embryo (120 days) | Bradley Bernstein, Broad | released |