Summary for ENCSR909ZPT
doi:10.17989/ENCSR909ZPT
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for HUES64 Cells using donors/samples:196;202;BioSam_825
- Donor diversity
- single
- Assay
- whole-genome shotgun bisulfite sequencing, ChIP-seq, polyA plus RNA-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K4me3, H3K9me3, H3K9ac
- Biosample summary
- Homo sapiens HUES64
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E016
- External resources
- Tags
Experiments in ENCSR909ZPT
Experiments
9 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR470PLJ | ChIP-seq | H3K9ac | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR316MNI | ChIP-seq | H3K9me3 | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR354DMU | whole-genome shotgun bisulfite sequencing | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | ||
| ENCSR426UWA | ChIP-seq | H3K36me3 | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR804MAP | ChIP-seq | H3K27ac | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR634MAK | ChIP-seq | H3K27me3 | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR894OYM | ChIP-seq | H3K4me3 | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR348EFG | polyA plus RNA-seq | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | ||
| ENCSR845WAQ | ChIP-seq | H3K4me1 | Homo sapiens HUES64 | Bradley Bernstein, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR254MCO | input library | Homo sapiens HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR293XMP | input library | Homo sapiens HUES64 | Bradley Bernstein, Broad | released |