Summary for ENCSR854HXZ
doi:10.17989/ENCSR854HXZ
Summary
- Status
- released
- Description
- Reference epigenome for mouse liver (8 week adult)
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, DNase-seq, RNA-seq, ChIP-seq
- Target
- POLR2A, H3K36me3, H3K4me3, CTCF, H3K27ac, H3K9ac, H3K27me3, H3K4me1
- Biosample summary
- C57BL/6J liver tissue
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR854HXZ
Experiments
11 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR000BYS | polyA plus RNA-seq | ENCDO072AAA | Mus musculus strain C57BL/6J liver tissue adult (2 months) | Thomas Gingeras, CSHL | released | ||
| ENCSR000AJU | RNA-seq | ENCDO072AAA | Mus musculus strain C57BL/6J liver tissue adult (2 months) | Thomas Gingeras, CSHL | released | ||
| ENCSR000CBU | ChIP-seq | CTCF | ENCDO956IXV | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released | |
| ENCSR000CBR | ChIP-seq | POLR2A | ENCDO956IXV | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released | |
| ENCSR000CAP | ChIP-seq | H3K4me3 | ENCDO956IXV | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released | |
| ENCSR000CDH | ChIP-seq | H3K27ac | ENCDO956IXV | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released | |
| ENCSR000CNI | DNase-seq | ENCDO072AAA | Mus musculus strain C57BL/6J liver tissue male adult (2 months) | John Stamatoyannopoulos, UW | released | ||
| ENCSR000CEN | ChIP-seq | H3K27me3 | ENCDO956IXV | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released | |
| ENCSR000CAO | ChIP-seq | H3K4me1 | ENCDO956IXV | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released | |
| ENCSR000CEO | ChIP-seq | H3K36me3 | ENCDO956IXV | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released | |
| ENCSR000CEQ | ChIP-seq | H3K9ac | ENCDO956IXV | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000CAX | input library | Mus musculus strain B6NCrl liver tissue male adult (2 months) | Bing Ren, UCSD | released |