Summary for ENCSR841LMD
doi:10.17989/ENCSR841LMD
Summary
- Status
- released
- Description
- REMC Epigenome (Class 4) for Primary Mononuclear Cells from Peripheral Blood using donors/samples:TC010;TC012
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, microRNA-seq, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K4me3, H3K9me3, H3K9ac
- Biosample summary
- peripheral blood mononuclear cell primary cell
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E062
- External resources
- Tags
Experiments in ENCSR841LMD
Experiments
19 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR354RTB | microRNA-seq | ENCDO839WKQ | Homo sapiens peripheral blood mononuclear cell female adult (28 years) | Joseph Costello, UCSF | released | ||
| ENCSR313TJR | polyA plus RNA-seq | ENCDO839WKQ | Homo sapiens peripheral blood mononuclear cell female adult (28 years) | Joseph Costello, UCSF | released | ||
| ENCSR368YPC | ChIP-seq | H3K4me3 | ENCDO688UPE | Homo sapiens peripheral blood mononuclear cell male adult (32 years) | Joseph Costello, UCSF | released | |
| ENCSR442BHP | ChIP-seq | H3K27me3 | ENCDO273TST | Homo sapiens peripheral blood mononuclear cell male adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR969DAF | ChIP-seq | H3K9ac | ENCDO250QGI | Homo sapiens peripheral blood mononuclear cell male adult (27 years) | Joseph Costello, UCSF | released | |
| ENCSR482QXO | ChIP-seq | H3K4me1 | ENCDO688UPE | Homo sapiens peripheral blood mononuclear cell male adult (32 years) | Joseph Costello, UCSF | released | |
| ENCSR336ZSZ | ChIP-seq | H3K4me1 | ENCDO250QGI | Homo sapiens peripheral blood mononuclear cell male adult (27 years) | Joseph Costello, UCSF | released | |
| ENCSR162MGR | ChIP-seq | H3K36me3 | ENCDO688UPE | Homo sapiens peripheral blood mononuclear cell male adult (32 years) | Joseph Costello, UCSF | released | |
| ENCSR605OYC | ChIP-seq | H3K9me3 | ENCDO839WKQ | Homo sapiens peripheral blood mononuclear cell female adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR206JRX | ChIP-seq | H3K4me3 | ENCDO839WKQ | Homo sapiens peripheral blood mononuclear cell female adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR615HXA | ChIP-seq | H3K27ac | ENCDO688UPE | Homo sapiens peripheral blood mononuclear cell male adult (32 years) | Joseph Costello, UCSF | released | |
| ENCSR449SFZ | ChIP-seq | H3K36me3 | ENCDO273TST | Homo sapiens peripheral blood mononuclear cell male adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR156XNC | ChIP-seq | H3K27ac | ENCDO839WKQ | Homo sapiens peripheral blood mononuclear cell female adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR390SFH | ChIP-seq | H3K27me3 | ENCDO839WKQ | Homo sapiens peripheral blood mononuclear cell female adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR980XMX | ChIP-seq | H3K9me3 | ENCDO688UPE | Homo sapiens peripheral blood mononuclear cell male adult (32 years) | Joseph Costello, UCSF | released | |
| ENCSR389IVA | ChIP-seq | H3K9me3 | ENCDO250QGI | Homo sapiens peripheral blood mononuclear cell male adult (27 years) | Joseph Costello, UCSF | released | |
| ENCSR489TBW | ChIP-seq | H3K9me3 | ENCDO273TST | Homo sapiens peripheral blood mononuclear cell male adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR804FSU | ChIP-seq | H3K9ac | ENCDO273TST | Homo sapiens peripheral blood mononuclear cell male adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR866UQO | ChIP-seq | H3K27me3 | ENCDO688UPE | Homo sapiens peripheral blood mononuclear cell male adult (32 years) | Joseph Costello, UCSF | released |
Control experiments
4 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR585UEE | input library | Homo sapiens peripheral blood mononuclear cell male adult (32 years) | Joseph Costello, UCSF | released | |
| ENCSR919MGB | input library | Homo sapiens peripheral blood mononuclear cell male adult (28 years) | Joseph Costello, UCSF | released | |
| ENCSR837ART | input library | Homo sapiens peripheral blood mononuclear cell male adult (27 years) | Joseph Costello, UCSF | released | |
| ENCSR625BDY | input library | Homo sapiens peripheral blood mononuclear cell female adult (28 years) | Joseph Costello, UCSF | released |