Summary for ENCSR774QPF

doi:10.17989/ENCSR774QPF

Summary

Status
released
Description
Reference epigenome for mouse hindbrain (16.5 day embryonic)
Donor diversity
single
Assay
whole-genome shotgun bisulfite sequencing, ATAC-seq, polyA plus RNA-seq, ChIP-seq, microRNA-seq
Target
H3K36me3, H3K4me3, H3K27ac, H3K9ac, H3K9me3, H3K27me3, H3K4me1, H3K4me2
Biosample summary
Mus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR774QPF

Experiments
12 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR623GSDATAC-seqMus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
ENCSR571RHMmicroRNA-seqMus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Ali Mortazavi, UCI
released
ENCSR161DAWChIP-seqH3K4me2Mus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
ENCSR718CAJChIP-seqH3K9acMus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
ENCSR285WZVpolyA plus RNA-seqMus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Barbara Wold, Caltech
released
ENCSR110TIWChIP-seqH3K4me3Mus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
ENCSR046SWIChIP-seqH3K27me3Mus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
ENCSR864OWVChIP-seqH3K36me3Mus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
ENCSR037RNNwhole-genome shotgun bisulfite sequencingMus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Joe Ecker, Salk
released
ENCSR797EYSChIP-seqH3K27acMus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
ENCSR257JSXChIP-seqH3K4me1Mus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
ENCSR427ZQBChIP-seqH3K9me3Mus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR752KDMinput libraryMus musculus strain B6NCrl hindbrain tissue embryo (16.5 days)Bing Ren, UCSD
released