Summary for ENCSR749IWM

doi:10.17989/ENCSR749IWM

Summary

Status
released
Description
Reference epigenome for mouse embryonic facial prominence (12.5 day embryonic)
Donor diversity
single
Assay
whole-genome shotgun bisulfite sequencing, ATAC-seq, polyA plus RNA-seq, ChIP-seq, microRNA-seq
Target
H3K36me3, H3K4me3, H3K27ac, H3K9ac, H3K27me3, H3K9me3, H3K4me1, H3K4me2
Biosample summary
Mus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR749IWM

Experiments
12 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR031HDNATAC-seqMus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR005FZJmicroRNA-seqMus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Ali Mortazavi, UCI
released
ENCSR582IBXChIP-seqH3K36me3Mus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR195NDOChIP-seqH3K4me2Mus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR105OGFChIP-seqH3K9acMus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR813SCQChIP-seqH3K27acMus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR316AZBChIP-seqH3K9me3Mus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR106QSUChIP-seqH3K4me3Mus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR645ETRChIP-seqH3K4me1Mus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR257GTRChIP-seqH3K27me3Mus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR628KWFwhole-genome shotgun bisulfite sequencingMus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Joe Ecker, Salk
released
ENCSR851HECpolyA plus RNA-seqMus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Barbara Wold, Caltech
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR445HBAinput libraryMus musculus strain B6NCrl embryonic facial prominence tissue embryo (12.5 days)Bing Ren, UCSD
released