Summary for ENCSR743BGS

doi:10.17989/ENCSR743BGS

Summary

Status
released
Description
Reference epigenome for human PC-3 cell line
Donor diversity
single
Assay
DNase-seq, ATAC-seq, ChIP-seq, RNA-seq, microRNA-seq
Target
H3K27me3, H3K4me1, H3K27ac, H3K36me3, CTCF, H3K9me3, H3K4me3
Biosample summary
Homo sapiens PC-3
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR743BGS

Experiments
11 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR359LODChIP-seqCTCFHomo sapiens PC-3Bradley Bernstein, Broad
released
ENCSR052AWEDNase-seqHomo sapiens PC-3John Stamatoyannopoulos, UW
released
ENCSR420NLCRNA-seqHomo sapiens PC-3Thomas Gingeras, CSHL
released
ENCSR566UMFChIP-seqH3K4me1Homo sapiens PC-3Bradley Bernstein, Broad
released
ENCSR275NCHChIP-seqH3K4me3Homo sapiens PC-3Bradley Bernstein, Broad
released
ENCSR849APHChIP-seqH3K36me3Homo sapiens PC-3Bradley Bernstein, Broad
released
ENCSR826UTDChIP-seqH3K27acHomo sapiens PC-3Bradley Bernstein, Broad
released
ENCSR881TWJChIP-seqH3K27me3Homo sapiens PC-3Bradley Bernstein, Broad
released
ENCSR339ZMJChIP-seqH3K9me3Homo sapiens PC-3Bradley Bernstein, Broad
released
ENCSR387TQNmicroRNA-seqHomo sapiens PC-3Ali Mortazavi, UCI
released
ENCSR499ASSATAC-seqHomo sapiens PC-3Michael Snyder, Stanford
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR328AHCinput libraryHomo sapiens PC-3Bradley Bernstein, Broad
released