Summary for ENCSR705YBY

doi:10.17989/ENCSR705YBY

Summary

Status
released
Description
Reference epigenome for mouse limb (14.5 day embryonic)
Donor diversity
composite
Assay
whole-genome shotgun bisulfite sequencing, DNase-seq, ATAC-seq, polyA plus RNA-seq, ChIP-seq, microRNA-seq
Target
H3K36me3, POLR2A, H3K4me3, H3K27ac, H3K9ac, H3K9me3, H3K27me3, H3K4me1, H3K4me2
Biosample summary
B6NCrl limb tissue
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR705YBY

Experiments
14 experiments
Accession
Assay
Target
Donors
Biosample summary
Lab
Status
Cart
ENCSR460BULATAC-seqENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR000CECChIP-seqPOLR2AENCDO956IXVMus musculus strain B6NCrl limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR529ERNChIP-seqH3K4me1ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR871CGPChIP-seqH3K36me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR333QJOChIP-seqH3K9me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR765SJFChIP-seqH3K27me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR099RYDwhole-genome shotgun bisulfite sequencingENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Joe Ecker, Salk
released
ENCSR274ACJChIP-seqH3K9acENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR636NXYDNase-seqENCDO956IXVMus musculus strain B6NCrl limb tissue embryo (14.5 days)John Stamatoyannopoulos, UW
released
ENCSR176BXCChIP-seqH3K4me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR631QAEChIP-seqH3K4me2ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR021ALFChIP-seqH3K27acENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR216NEGpolyA plus RNA-seqENCDO956IXVMus musculus strain B6NCrl limb tissue embryo (14.5 days)Barbara Wold, Caltech
released
ENCSR669XBUmicroRNA-seqENCDO956IXVMus musculus strain B6NCrl limb tissue embryo (14.5 days)Ali Mortazavi, UCI
released
Control experiments
2 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR000CCPinput libraryMus musculus strain B6NCrl limb tissue embryo (14.5 days)Bing Ren, UCSD
archived
ENCSR232EOOinput libraryMus musculus strain B6NTac;B6NCrl/Lap limb tissue embryo (14.5 days)Bing Ren, UCSD
released