Summary for ENCSR695BUY
doi:10.17989/ENCSR695BUY
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Foreskin Keratinocyte Primary Cells using donors/samples:skin03
- Donor diversity
- single
- Assay
- whole-genome shotgun bisulfite sequencing, MeDIP-seq, polyA plus RNA-seq, ChIP-seq, MRE-seq, microRNA-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, Methylcytidine, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens foreskin keratinocyte male newborn
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E058
- External resources
Experiments in ENCSR695BUY
Experiments
11 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR599ZLO | microRNA-seq | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released | ||
ENCSR672JUF | polyA plus RNA-seq | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released | ||
ENCSR892UWR | whole-genome shotgun bisulfite sequencing | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | archived | ||
ENCSR643ACO | MeDIP-seq | Methylcytidine | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | archived | |
ENCSR384EGV | MRE-seq | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | archived | ||
ENCSR498PMM | ChIP-seq | H3K9me3 | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released | |
ENCSR853XJK | ChIP-seq | H3K27me3 | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released | |
ENCSR115BXL | ChIP-seq | H3K4me1 | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released | |
ENCSR172FMH | ChIP-seq | H3K4me3 | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released | |
ENCSR377FXG | ChIP-seq | H3K36me3 | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released | |
ENCSR666TFS | ChIP-seq | H3K27ac | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR155GOF | input library | Homo sapiens foreskin keratinocyte male newborn | Joseph Costello, UCSF | released |