Summary for ENCSR682AXR
doi:10.17989/ENCSR682AXR
Summary
- Status
- released
- Description
- Reference epigenome for human B cell
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, DNase-seq, small RNA-seq, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, CTCF, H3K9me3, H3K4me3
- Biosample summary
- B cell primary cell
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR682AXR
Experiments
10 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR424XBP | ChIP-seq | H3K36me3 | ENCDO114AAA, ENCDO115AAA | Homo sapiens B cell female adult (27 years) and female adult (43 years) | Bradley Bernstein, Broad | released | |
| ENCSR290YLQ | ChIP-seq | H3K4me1 | ENCDO115AAA | Homo sapiens B cell female adult (27 years) | Bradley Bernstein, Broad | released | |
| ENCSR878JSF | ChIP-seq | H3K4me3 | ENCDO114AAA | Homo sapiens B cell female adult (43 years) | Bradley Bernstein, Broad | released | |
| ENCSR005WWZ | ChIP-seq | H3K9me3 | ENCDO114AAA | Homo sapiens B cell female adult (43 years) | Bradley Bernstein, Broad | released | |
| ENCSR000AUV | ChIP-seq | CTCF | ENCDO115AAA, ENCDO114AAA | Homo sapiens B cell female adult (27 years) and female adult (43 years) | Bradley Bernstein, Broad | released | |
| ENCSR000EMJ | DNase-seq | ENCDO114AAA | Homo sapiens B cell female adult (43 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR000CTV | polyA plus RNA-seq | ENCDO114AAA, ENCDO115AAA | Homo sapiens B cell female adult (27 years) and female adult (43 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR000AUP | ChIP-seq | H3K27ac | ENCDO115AAA | Homo sapiens B cell female adult (27 years) | Bradley Bernstein, Broad | released | |
| ENCSR162DGX | ChIP-seq | H3K27me3 | ENCDO115AAA | Homo sapiens B cell female adult (27 years) | Bradley Bernstein, Broad | released | |
| ENCSR000CUU | small RNA-seq | ENCDO114AAA, ENCDO115AAA | Homo sapiens B cell female adult (27 years) and female adult (43 years) | Thomas Gingeras, CSHL | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000AUW | input library | Homo sapiens B cell female adult (27 years) | Bradley Bernstein, Broad | released | |
| ENCSR805DRF | input library | Homo sapiens B cell female adult (43 years) | Bradley Bernstein, Broad | released |