Summary for ENCSR663TPA
Superseded by ENCSR339JWY
Summary
- Status
- archived
- Description
- REMC Epigenome (ENCODE) for Skeletal Muscle Myoblasts Cells using donors/samples:HSMM
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, RRBS, ChIP-seq, DNase-seq
- Target
- H3K9ac, H3K79me2, H4K20me1, H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3, H3K4me2, H2AFZ
- Biosample summary
- skeletal muscle myoblast primary cell
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E120
- External resources
- None submitted
Experiments in ENCSR663TPA
Experiments
14 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR000COY | polyA plus RNA-seq | ENCDO094AAA | Homo sapiens skeletal muscle myoblast | Thomas Gingeras, CSHL | released | ||
| ENCSR000ANR | ChIP-seq | H3K9me3 | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANK | ChIP-seq | H3K4me3 | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANF | ChIP-seq | H3K27ac | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANI | ChIP-seq | H3K4me1 | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANH | ChIP-seq | H3K36me3 | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANG | ChIP-seq | H3K27me3 | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANQ | ChIP-seq | H3K79me2 | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANJ | ChIP-seq | H3K4me2 | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000APA | ChIP-seq | H2AFZ | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANM | ChIP-seq | H4K20me1 | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000ANL | ChIP-seq | H3K9ac | ENCDO341XKY | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released | |
| ENCSR000EOO | DNase-seq | ENCDO094AAA | Homo sapiens skeletal muscle myoblast | John Stamatoyannopoulos, UW | released | ||
| ENCSR000DFD | RRBS | ENCDO335AAA | Homo sapiens skeletal muscle myoblast | Richard Myers, HAIB | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000ANN | input library | Homo sapiens skeletal muscle myoblast male adult (22 years) | Bradley Bernstein, Broad | released |