Summary for ENCSR631XRW
doi:10.17989/ENCSR631XRW
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Left Ventricle using donors/samples:STL001;STL003
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, whole-genome shotgun bisulfite sequencing, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K4me3
- Biosample summary
- heart left ventricle tissue
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E095
- External resources
- Tags
Experiments in ENCSR631XRW
Experiments
16 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR693CSQ | polyA plus RNA-seq | ENCDO478OMA | Homo sapiens heart left ventricle tissue male child (3 years) | Joe Ecker, Salk | released | ||
| ENCSR769LNJ | polyA plus RNA-seq | ENCDO058AAA | Homo sapiens heart left ventricle tissue male adult (34 years) | Joe Ecker, Salk | released | ||
| ENCSR579AXB | whole-genome shotgun bisulfite sequencing | ENCDO058AAA | Homo sapiens heart left ventricle tissue male adult (34 years) | Joe Ecker, Salk | released | ||
| ENCSR012TGL | whole-genome shotgun bisulfite sequencing | ENCDO478OMA | Homo sapiens heart left ventricle tissue male child (3 years) | Joe Ecker, Salk | released | ||
| ENCSR150QXE | ChIP-seq | H3K27ac | ENCDO058AAA | Homo sapiens heart left ventricle tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR487BEW | ChIP-seq | H3K4me3 | ENCDO058AAA | Homo sapiens heart left ventricle tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR877RMK | ChIP-seq | H3K36me3 | ENCDO478OMA | Homo sapiens heart left ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR230VEM | ChIP-seq | H3K4me1 | ENCDO478OMA | Homo sapiens heart left ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR503YOF | ChIP-seq | H3K27me3 | ENCDO058AAA | Homo sapiens heart left ventricle tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR377KDN | ChIP-seq | H3K4me3 | ENCDO478OMA | Homo sapiens heart left ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR442JTA | ChIP-seq | H3K9me3 | ENCDO478OMA | Homo sapiens heart left ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR176KNR | ChIP-seq | H3K9me3 | ENCDO058AAA | Homo sapiens heart left ventricle tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR557DFM | ChIP-seq | H3K27ac | ENCDO478OMA | Homo sapiens heart left ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR434MDA | ChIP-seq | H3K36me3 | ENCDO058AAA | Homo sapiens heart left ventricle tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR109RDK | ChIP-seq | H3K27me3 | ENCDO478OMA | Homo sapiens heart left ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR111WGZ | ChIP-seq | H3K4me1 | ENCDO058AAA | Homo sapiens heart left ventricle tissue male adult (34 years) | Bing Ren, UCSD | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR961QMI | input library | Homo sapiens heart left ventricle tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR694AEQ | input library | Homo sapiens heart left ventricle tissue male child (3 years) | Bing Ren, UCSD | released |