Summary for ENCSR598APU
doi:10.17989/ENCSR598APU
Summary
- Status
- released
- Description
- REMC Epigenome (Class 3) for Primary T cells from Cord Blood using donors/samples:CD3_39661;CD3_39804;CD3_39811;CD3_39840
- Donor diversity
- composite
- Assay
- RRBS, transcription profiling by array assay, ChIP-seq, DNase-seq
- Target
- H3K27me3, H3K4me1, H3K36me3, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens T-cell
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E033
- External resources
- Tags
Experiments in ENCSR598APU
Experiments
10 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR956YPN | transcription profiling by array assay | ENCDO685OXD | Homo sapiens T-cell | John Stamatoyannopoulos, UW | archived | ||
| ENCSR115LCQ | transcription profiling by array assay | ENCDO150FXK | Homo sapiens T-cell | John Stamatoyannopoulos, UW | archived | ||
| ENCSR800SRJ | RRBS | ENCDO819ZMM | Homo sapiens T-cell | Bradley Bernstein, Broad | archived | ||
| ENCSR621XWM | ChIP-seq | H3K36me3 | ENCDO460ZVO, ENCDO269ABJ | Homo sapiens T-cell | Bradley Bernstein, Broad | released | |
| ENCSR113FMX | ChIP-seq | H3K4me1 | ENCDO727HSS, ENCDO139RPR | Homo sapiens T-cell | Bradley Bernstein, Broad | released | |
| ENCSR974EGY | ChIP-seq | H3K9me3 | ENCDO139RPR, ENCDO727HSS | Homo sapiens T-cell | Bradley Bernstein, Broad | released | |
| ENCSR815KXD | DNase-seq | ENCDO150FXK | Homo sapiens T-cell | John Stamatoyannopoulos, UW | archived | ||
| ENCSR040DGJ | DNase-seq | ENCDO685OXD | Homo sapiens T-cell | John Stamatoyannopoulos, UW | released | ||
| ENCSR902BOX | ChIP-seq | H3K4me3 | ENCDO460ZVO, ENCDO269ABJ | Homo sapiens T-cell | Bradley Bernstein, Broad | released | |
| ENCSR277WTO | ChIP-seq | H3K27me3 | ENCDO460ZVO, ENCDO269ABJ | Homo sapiens T-cell | Bradley Bernstein, Broad | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR281NDN | input library | Homo sapiens T-cell | Bradley Bernstein, Broad | released |