Summary for ENCSR571BOJ

doi:10.17989/ENCSR571BOJ

Summary

Status
released
Description
Reference epigenome for mouse stomach (0 day postnatal)
Donor diversity
composite
Assay
whole-genome shotgun bisulfite sequencing, DNase-seq, ATAC-seq, polyA plus RNA-seq, ChIP-seq, microRNA-seq
Target
H3K36me3, H3K4me3, CTCF, H3K27ac, H3K9ac, EP300, H3K9me3, H3K27me3, H3K4me1, H3K4me2
Biosample summary
B6NCrl stomach tissue
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR571BOJ

Experiments
15 experiments
Accession
Assay
Target
Donors
Biosample summary
Lab
Status
Cart
ENCSR597BGPATAC-seqENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR104QENChIP-seqCTCFENCDO956IXVMus musculus strain B6NCrl stomach tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR450KVWChIP-seqEP300ENCDO956IXVMus musculus strain B6NCrl stomach tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR516KLOChIP-seqH3K36me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR346FJGChIP-seqH3K27acENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR969CPKChIP-seqH3K27me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR940CMIChIP-seqH3K4me1ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR916CBNChIP-seqH3K4me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR286OOJwhole-genome shotgun bisulfite sequencingENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Joe Ecker, Salk
released
ENCSR556DLJChIP-seqH3K9me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR288LNFChIP-seqH3K4me2ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR048IZJChIP-seqH3K9acENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR538NTYmicroRNA-seqENCDO956IXVMus musculus strain B6NCrl stomach tissue postnatal (0 days)Ali Mortazavi, UCI
released
ENCSR178GUSpolyA plus RNA-seqENCDO956IXVMus musculus strain B6NCrl stomach tissue postnatal (0 days)Barbara Wold, Caltech
released
ENCSR969OPEDNase-seqENCDO956IXVMus musculus strain B6NCrl stomach tissue postnatal (0 days)John Stamatoyannopoulos, UW
released
Control experiments
4 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR389SQZinput libraryMus musculus strain B6NCrl stomach tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR993MMDinput libraryMus musculus strain B6NCrl stomach tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR281FZSinput libraryMus musculus strain B6NCrl stomach tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR050VUZinput libraryMus musculus strain B6NTac;B6NCrl/Lap stomach tissue postnatal (0 days)Bing Ren, UCSD
released