Summary for ENCSR561OQA

doi:10.17989/ENCSR561OQA

Summary

Status
released
Description
REMC Epigenome (Class 2) for Small Intestine using donors/samples:STL001; STL003
Donor diversity
composite
Assay
polyA plus RNA-seq, DNase-seq, whole-genome shotgun bisulfite sequencing, ChIP-seq
Target
H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K4me3
Biosample summary
small intestine tissue
Diseases
Not reported

Attribution

Roadmap Epigenomics Mapping Consortium
Lab
Anshul Kundaje, Stanford
Award
U01DA025956 (Roadmap Epigenomics, Baylor)
Project
Roadmap
Aliases
roadmap-epigenomics:E109
External resources

Experiments in ENCSR561OQA

Experiments
11 experiments
Accession
Assay
Target
Donors
Biosample summary
Lab
Status
Cart
ENCSR719HROpolyA plus RNA-seqENCDO058AAAHomo sapiens small intestine tissue male adult (34 years)Joe Ecker, Salk
released
ENCSR618IQYpolyA plus RNA-seqENCDO478OMAHomo sapiens small intestine tissue male child (3 years)Joe Ecker, Salk
released
ENCSR265ZHHwhole-genome shotgun bisulfite sequencingENCDO478OMAHomo sapiens small intestine tissue male child (3 years)Joe Ecker, Salk
released
ENCSR113KSFwhole-genome shotgun bisulfite sequencingENCDO058AAAHomo sapiens small intestine tissue male adult (34 years)Joe Ecker, Salk
released
ENCSR931UQBDNase-seqENCDO058AAAHomo sapiens small intestine tissue male adult (34 years)John Stamatoyannopoulos, UW
released
ENCSR454VRAChIP-seqH3K27acENCDO478OMAHomo sapiens small intestine tissue male child (3 years)Bing Ren, UCSD
released
ENCSR179NYVChIP-seqH3K4me1ENCDO478OMAHomo sapiens small intestine tissue male child (3 years)Bing Ren, UCSD
released
ENCSR958DEWChIP-seqH3K36me3ENCDO478OMAHomo sapiens small intestine tissue male child (3 years)Bing Ren, UCSD
released
ENCSR417RFSChIP-seqH3K9me3ENCDO478OMAHomo sapiens small intestine tissue male child (3 years)Bing Ren, UCSD
released
ENCSR792IJAChIP-seqH3K4me3ENCDO058AAAHomo sapiens small intestine tissue male adult (34 years)Bing Ren, UCSD
released
ENCSR340OPIChIP-seqH3K27me3ENCDO478OMAHomo sapiens small intestine tissue male child (3 years)Bing Ren, UCSD
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR687YOPinput libraryHomo sapiens small intestine tissue male child (3 years)Bing Ren, UCSD
released